RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 PSKH2Q96QS6 385 aa14.09□□□□□ -0.15
USF1-202ENST00000368020 OMDQ99983 421 aa14.09□□□□□ -0.15
USF1-202ENST00000368020 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.09□□□□□ -0.15
USF1-202ENST00000368020 UBA2Q9UBT2 640 aaPredicted RBP14.09□□□□□ -0.15
USF1-202ENST00000368020 A0A1B0GVM2 712 aa14.08□□□□□ -0.16
USF1-202ENST00000368020 ZNF840PA6NDX5 716 aa14.08□□□□□ -0.16
USF1-202ENST00000368020 TCAF2A6NFQ2 919 aa14.08□□□□□ -0.16
USF1-202ENST00000368020 KDELR3O43731 214 aa14.08□□□□□ -0.16
USF1-202ENST00000368020 GLP2RO95838 553 aa14.08□□□□□ -0.16
USF1-202ENST00000368020 GNAZP19086 355 aa14.08□□□□□ -0.16
USF1-202ENST00000368020 ARRB2P32121 409 aa14.08□□□□□ -0.16
USF1-202ENST00000368020 OR1D2P34982 312 aa14.08□□□□□ -0.16
USF1-202ENST00000368020 AVPR1AP37288 418 aa14.08□□□□□ -0.16
USF1-202ENST00000368020 ALDH1A3P47895 512 aa14.08□□□□□ -0.16
USF1-202ENST00000368020 OXCT1P55809 520 aa14.08□□□□□ -0.16
USF1-202ENST00000368020 UBAP2LQ14157 1087 aaKnown RBP14.08□□□□□ -0.16
USF1-202ENST00000368020 TAF12Q16514 161 aa14.08□□□□□ -0.16
USF1-202ENST00000368020 SDCCAG8Q86SQ7 713 aaPredicted RBP14.08□□□□□ -0.16
USF1-202ENST00000368020 DDX53Q86TM3 631 aaKnown RBP14.08□□□□□ -0.16
USF1-202ENST00000368020 PGBD5Q8N414 524 aa14.08□□□□□ -0.16
USF1-202ENST00000368020 OR6P1Q8NGX9 317 aa14.08□□□□□ -0.16
USF1-202ENST00000368020 ZNF461Q8TAF7 563 aa14.08□□□□□ -0.16
USF1-202ENST00000368020 BCL7CQ8WUZ0 217 aaPredicted RBP14.08□□□□□ -0.16
USF1-202ENST00000368020 NXNL1Q96CM4 212 aa14.08□□□□□ -0.16
USF1-202ENST00000368020 TRMOQ9BU70 441 aa14.08□□□□□ -0.16
USF1-202ENST00000368020 CINPQ9BW66 212 aaPredicted RBP14.08□□□□□ -0.16
USF1-202ENST00000368020 MCM8Q9UJA3 840 aa14.08□□□□□ -0.16
USF1-202ENST00000368020 PLA2G4CQ9UP65 541 aa14.08□□□□□ -0.16
USF1-202ENST00000368020 VPS9D1Q9Y2B5 631 aa14.08□□□□□ -0.16
USF1-202ENST00000368020 ANKRD36A6QL64 1941 aa14.08□□□□□ -0.16
USF1-202ENST00000368020 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.07□□□□□ -0.16
USF1-202ENST00000368020 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.07□□□□□ -0.16
USF1-202ENST00000368020 PFDN6O15212 129 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 LDB2O43679 373 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 DLX3O60479 287 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 RPP40O75818 363 aaKnown RBP14.07□□□□□ -0.16
USF1-202ENST00000368020 LUC7L3O95232 432 aaKnown RBP14.07□□□□□ -0.16
USF1-202ENST00000368020 PIGNO95427 931 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 SOD2P04179 222 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 SBK3P0C264 359 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 NCF2P19878 526 aaPredicted RBP14.07□□□□□ -0.16
USF1-202ENST00000368020 BMPR1AP36894 532 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 GLRBP48167 497 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 KCNQ1P51787 676 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 NAGLUP54802 743 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 SATB1Q01826 763 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 ZNF177Q13360 481 aaPredicted RBP14.07□□□□□ -0.16
USF1-202ENST00000368020 CCDC6Q16204 474 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 CMPK2Q5EBM0 449 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 ARL13AQ5H913 290 aaPredicted RBP14.07□□□□□ -0.16
USF1-202ENST00000368020 SH2D4BQ5SQS7 431 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 IL31Q6EBC2 164 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 CNSTQ6PJW8 725 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 ULK2Q8IYT8 1036 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 GIMAP7Q8NHV1 300 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 FAM161BQ96MY7 647 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 GPAMQ9HCL2 828 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 INTS10Q9NVR2 710 aaKnown RBP14.07□□□□□ -0.16
USF1-202ENST00000368020 NDE1Q9NXR1 346 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 CDYLQ9Y232 598 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 VWA7Q9Y334 891 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 KIAA1671Q9BY89 1806 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.07□□□□□ -0.16
USF1-202ENST00000368020 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.07□□□□□ -0.16
USF1-202ENST00000368020 LINC01553A4QN01 128 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 C5orf67F2Z3F1 127 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 ENTPD5O75356 428 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 ABLIM3O94929 683 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 RHOCP08134 193 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 GM2AP17900 193 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 TFEBP19484 476 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 GLDCP23378 1020 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 HOXD9P28356 352 aaPredicted RBP14.07□□□□□ -0.16
USF1-202ENST00000368020 ACVRL1P37023 503 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 PFKPQ01813 784 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 USP4Q13107 963 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 KPNB1Q14974 876 aaKnown RBP14.07□□□□□ -0.16
USF1-202ENST00000368020 TECRLQ5HYJ1 363 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 ADGRF1Q5T601 910 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 HECTD2Q5U5R9 776 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 TAS1R1Q7RTX1 841 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 CIR1Q86X95 450 aaPredicted RBP14.07□□□□□ -0.16
USF1-202ENST00000368020 MFSD6LQ8IWD5 586 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 HEXDCQ8WVB3 486 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 HDAC10Q969S8 669 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 UBXN10Q96LJ8 280 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 IGSF5Q9NSI5 407 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 STX18Q9P2W9 335 aaKnown RBP14.07□□□□□ -0.16
USF1-202ENST00000368020 ANGPTL2Q9UKU9 493 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 ARHGAP26Q9UNA1 814 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 LZTS1Q9Y250 596 aa14.07□□□□□ -0.16
USF1-202ENST00000368020 ZFP37Q9Y6Q3 630 aaPredicted RBP14.07□□□□□ -0.16
USF1-202ENST00000368020 CCDC189A1A4V9 331 aa14.06□□□□□ -0.16
USF1-202ENST00000368020 TYW5A2RUC4 315 aaKnown RBP14.06□□□□□ -0.16
USF1-202ENST00000368020 COCHO43405 550 aa14.06□□□□□ -0.16
USF1-202ENST00000368020 IPO13O94829 963 aaKnown RBP14.06□□□□□ -0.16
USF1-202ENST00000368020 PSMG1O95456 288 aa14.06□□□□□ -0.16
USF1-202ENST00000368020 S1PR4O95977 384 aa14.06□□□□□ -0.16
USF1-202ENST00000368020 RB1P06400 928 aa14.06□□□□□ -0.16
USF1-202ENST00000368020 THRAP10827 490 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms