RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 ARMC5Q96C12 935 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 H0YIN7 160 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 TIPRLO75663 272 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 MMP12P39900 470 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 EPHA4P54764 986 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 MAB21L1Q13394 359 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SGCDQ92629 289 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 AASSQ9UDR5 926 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 PFDN2Q9UHV9 154 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 RNF24Q9Y225 148 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 CCDC195A0A1B0GUA6 201 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 NR3C1P04150 777 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 OGDHQ02218 1023 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 PXDC1Q5TGL8 231 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 PIK3R6Q5UE93 754 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF527Q8NB42 609 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 C3orf58Q8NDZ4 430 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SPOCK2Q92563 424 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 EPB41L4BQ9H329 900 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 AS3MTQ9HBK9 375 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 CMTM6Q9NX76 183 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 RNF150Q9ULK6 438 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 MAB21L2Q9Y586 359 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 CTTNBP2Q8WZ74 1663 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 PIGRP01833 764 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 POU3F3P20264 500 aaPredicted RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 GABPAQ06546 454 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 GPRC6AQ5T6X5 926 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 IZUMO3Q5VZ72 239 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 FBXO42Q6P3S6 717 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 NOP9Q86U38 636 aaKnown RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF410Q86VK4 478 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 NAT14Q8WUY8 206 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 E2F7Q96AV8 911 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 HSFY1Q96LI6 401 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 TMEM8AQ9HCN3 771 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 BCL9LQ86UU0 1499 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 C1orf232A0A0U1RR37 186 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SPDYE5A6NIY4 337 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 HTR2AP28223 471 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 NDUFAF6Q330K2 333 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 NCOR1P1Q9H4R4 102 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 PTPRHQ9HD43 1115 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 PPARGC1AQ9UBK2 798 aaKnown RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 RPTORQ8N122 1335 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 WTIPA6NIX2 430 aaPredicted RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 TRIM64CA6NLI5 447 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 CYP2D6P10635 497 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 CD79BP40259 229 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ACTR2P61160 394 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 FAM198BQ6UWH4 519 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 RAVER2Q9HCJ3 691 aaKnown RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 MORF4L1Q9UBU8 362 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ENTPD4Q9Y227 616 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 A0A087X1B8 175 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SPATA31C2B4DYI2 1134 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 E7EWF7 191 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 HEATR6Q6AI08 1181 aaKnown RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 USP49Q70CQ1 688 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ADGRD2Q7Z7M1 963 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 CABP7Q86V35 215 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 CAND1Q86VP6 1230 aaKnown RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 EMC1Q8N766 993 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SETD7Q8WTS6 366 aaKnown RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 PRKAB1Q9Y478 270 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SNX8Q9Y5X2 465 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 RHPN2P1A8MT19 583 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ADAP00813 363 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SBK2P0C263 348 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 AXLP30530 894 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 UQCC3Q6UW78 93 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 WDR88Q6ZMY6 472 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 MSANTD3Q96H12 275 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 GLT1D1Q96MS3 346 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 CATSPERBQ9H7T0 1116 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 EXTL2Q9UBQ6 330 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 RUVBL1Q9Y265 456 aaKnown RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ARRDC5A6NEK1 342 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 IMPA2O14732 288 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 CHN1P15882 459 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 IREB2P48200 963 aaKnown RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 RAB5BP61020 215 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ROR1Q01973 937 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 HSPA14Q0VDF9 509 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ZSWIM3Q96MP5 696 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 TCF7L1Q9HCS4 588 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 KCNQ5Q9NR82 932 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 FAM155AB1AL88 458 aaPredicted RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SULT1C2O00338 296 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 FOXD2O60548 495 aaPredicted RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 GATBO75879 557 aaKnown RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ANGEL2Q5VTE6 544 aaKnown RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ATG16L2Q8NAA4 619 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 IL17REQ8NFR9 667 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 CD72P21854 359 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SUOXP51687 545 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 RASSF6Q6ZTQ3 369 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SKA3Q8IX90 412 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 DHRSXQ8N5I4 330 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 MINDY1Q8N5J2 469 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms