RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 ZNF460Q14592 562 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 NRF1Q16656 503 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 IL23RQ5VWK5 629 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 PM20D1Q6GTS8 502 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 OTOP3Q7RTS5 596 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 PATL1Q86TB9 770 aaKnown RBP14.8□□□□□ -0.04
PRKN-204ENST00000366896 DBF4BQ8NFT6 615 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 USP33Q8TEY7 942 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 EDEM1Q92611 657 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 TRIM43Q96BQ3 446 aaPredicted RBP14.8□□□□□ -0.04
PRKN-204ENST00000366896 MAELQ96JY0 434 aaKnown RBP14.8□□□□□ -0.04
PRKN-204ENST00000366896 ZFP42Q96MM3 310 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 PPP1R2P1Q96PQ5 205 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 SMOQ99835 787 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 UNKQ9C0B0 810 aaKnown RBP14.8□□□□□ -0.04
PRKN-204ENST00000366896 TMEM165Q9HC07 324 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 ZBTB26Q9HCK0 441 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 RGS18Q9NS28 235 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 ZDHHC2Q9UIJ5 367 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 CDYLQ9Y232 598 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 MYRFQ9Y2G1 1151 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 TDRKHQ9Y2W6 561 aaKnown RBP14.8□□□□□ -0.04
PRKN-204ENST00000366896 AAR2Q9Y312 384 aaKnown RBP14.8□□□□□ -0.04
PRKN-204ENST00000366896 A0A0U1RQF3 1178 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 KIAA0355O15063 1070 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 ZNF623O75123 536 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 JCHAINP01591 159 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 SLC35E2BP0CK96 405 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 GABRB3P28472 473 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 PSMD8P48556 350 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 CXCR3P49682 368 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 NAGLUP54802 743 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 IKBKEQ14164 716 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 MRPL10Q7Z7H8 261 aaKnown RBP14.8□□□□□ -0.04
PRKN-204ENST00000366896 SLC41A1Q8IVJ1 513 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 SPNS2Q8IVW8 549 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 SCYL1Q96KG9 808 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 COLEC11Q9BWP8 271 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 FTHL17Q9BXU8 183 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 COQ10BQ9H8M1 238 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 EFCAB1Q9HAE3 211 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 OLAHQ9NV23 265 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 HACD3Q9P035 362 aa14.8□□□□□ -0.04
PRKN-204ENST00000366896 COL4A4P53420 1690 aaPredicted RBP14.79□□□□□ -0.04
PRKN-204ENST00000366896 MKI67P46013 3256 aaKnown RBP14.79□□□□□ -0.04
PRKN-204ENST00000366896 MEIS3P2A8K0S8 358 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 PTGESO14684 152 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 ITGB8P26012 769 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 ENTPD1P49961 510 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 NDST2P52849 883 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 PDAP1Q13442 181 aaKnown RBP14.79□□□□□ -0.04
PRKN-204ENST00000366896 ART3Q13508 389 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 TCTN1Q2MV58 587 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 SLC44A4Q53GD3 710 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 PCID2Q5JVF3 399 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 DCLRE1AQ6PJP8 1040 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 TMEM86AQ8N2M4 240 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 SPATA6LQ8N4H0 392 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 LZTR1Q8N653 840 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 ZMIZ2Q8NF64 920 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 GRIN3AQ8TCU5 1115 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 RSPH1Q8WYR4 309 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 SEPT8Q92599 483 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 RHOBTB2Q9BYZ6 727 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 CAAP1Q9H8G2 361 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 PRDM5Q9NQX1 630 aaPredicted RBP14.79□□□□□ -0.04
PRKN-204ENST00000366896 PNPLA3Q9NST1 481 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 UTP6Q9NYH9 597 aaKnown RBP14.79□□□□□ -0.04
PRKN-204ENST00000366896 TIMM13Q9Y5L4 95 aaPredicted RBP14.79□□□□□ -0.04
PRKN-204ENST00000366896 NUP205Q92621 2012 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 FNDC1Q4ZHG4 1894 aaPredicted RBP14.79□□□□□ -0.04
PRKN-204ENST00000366896 SUPT3HO75486 399 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 BMP10O95393 424 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 TIMP1P01033 207 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 LHX1P48742 406 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 DNAJB13P59910 316 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 USP10Q14694 798 aaKnown RBP14.79□□□□□ -0.04
PRKN-204ENST00000366896 COL13A1Q5TAT6 717 aaPredicted RBP14.79□□□□□ -0.04
PRKN-204ENST00000366896 PKN3Q6P5Z2 889 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 MFSD6LQ8IWD5 586 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 CENPLQ8N0S6 344 aaPredicted RBP14.79□□□□□ -0.04
PRKN-204ENST00000366896 LSMEM2Q8N112 164 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 SCML4Q8N228 414 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 SPATA22Q8NHS9 363 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 HM13Q8TCT9 377 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 ATP6V1E2Q96A05 226 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 RMND5BQ96G75 393 aaPredicted RBP14.79□□□□□ -0.04
PRKN-204ENST00000366896 TSPYL2Q9H2G4 693 aaPredicted RBP14.79□□□□□ -0.04
PRKN-204ENST00000366896 PAIP2BQ9ULR5 123 aaKnown RBP14.79□□□□□ -0.04
PRKN-204ENST00000366896 ACOT9Q9Y305 439 aa14.79□□□□□ -0.04
PRKN-204ENST00000366896 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.79□□□□□ -0.04
PRKN-204ENST00000366896 TRPC5OSA6NMA1 111 aa14.78□□□□□ -0.04
PRKN-204ENST00000366896 TMEM233B4DJY2 109 aa14.78□□□□□ -0.04
PRKN-204ENST00000366896 TRIM38O00635 465 aa14.78□□□□□ -0.04
PRKN-204ENST00000366896 VAPBO95292 243 aa14.78□□□□□ -0.04
PRKN-204ENST00000366896 C8BP07358 591 aa14.78□□□□□ -0.04
PRKN-204ENST00000366896 KPNA2P52292 529 aaKnown RBP14.78□□□□□ -0.04
PRKN-204ENST00000366896 PHEXP78562 749 aa14.78□□□□□ -0.04
PRKN-204ENST00000366896 MPP1Q00013 466 aa14.78□□□□□ -0.04
PRKN-204ENST00000366896 LRRC8EQ6NSJ5 796 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms