RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 TYROBPO43914 113 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 TOP3BO95985 862 aaKnown RBP16.4■□□□□ 0.22
SCAF1-201ENST00000360565 DGKAP23743 735 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 PAX3P23760 479 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 GSSP48637 474 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 GLUD2P49448 558 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 NUDT18Q6ZVK8 323 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 HFE2Q6ZVN8 426 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 SYTL1Q8IYJ3 562 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 SPPL2AQ8TCT8 520 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 SELENOMQ8WWX9 145 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 TMEM159Q96B96 161 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 ROGDIQ9GZN7 287 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 DDX28Q9NUL7 540 aaKnown RBP16.4■□□□□ 0.22
SCAF1-201ENST00000360565 PRR23AA6NEV1 266 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 FAM159BA6NKW6 160 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 LYNP07948 512 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 PRKAR2AP13861 404 aaKnown RBP16.4■□□□□ 0.22
SCAF1-201ENST00000360565 VCLP18206 1134 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 ATP6V0D1P61421 351 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 SLC18A2Q05940 514 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 IRGQQ8WZA9 623 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 SYT11Q9BT88 431 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 NKX1-2Q9UD57 310 aaPredicted RBP16.4■□□□□ 0.22
SCAF1-201ENST00000360565 LNPEPQ9UIQ6 1025 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 POMPQ9Y244 141 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 A0A0J9YYE9 177 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 SMIM31A0A1B0GVY4 71 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 ABCB1P08183 1280 aaPredicted RBP16.39■□□□□ 0.21
SCAF1-201ENST00000360565 CTPS1P17812 591 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 PEX2P28328 305 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 RAP1GDS1P52306 607 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 INCA1Q0VD86 236 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 SLC9A4Q6AI14 798 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 B3GNT6Q6ZMB0 384 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 ZNF621Q6ZSS3 439 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 HOMEZQ8IX15 550 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 ZNF276Q8N554 614 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 SLC25A51Q9H1U9 297 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 ZNHIT2Q9UHR6 403 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 C9JVG2 144 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 OR56A5P0C7T3 313 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 HDCP19113 662 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 GRK4P32298 578 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 INHBEP58166 350 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 SMAD3P84022 425 aaKnown RBP16.39■□□□□ 0.21
SCAF1-201ENST00000360565 MAPKAPK3Q16644 382 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 ZC3H12BQ5HYM0 836 aaKnown RBP16.39■□□□□ 0.21
SCAF1-201ENST00000360565 TMCO5AQ8N6Q1 288 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 LINGO1Q96FE5 620 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 SIGLEC10Q96LC7 697 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 CCDC28BQ9BUN5 200 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 LAMA4Q16363 1823 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 ULK1O75385 1050 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 BCL10O95999 233 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 RHOQP17081 205 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 CYP2A7P20853 494 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 PSMB9P28065 219 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 SERPINA4P29622 427 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 NR1H2P55055 460 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 OLIG2Q13516 323 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 TIGD5Q53EQ6 642 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 ZNF618Q5T7W0 954 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 KIAA0408Q6ZU52 694 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 NECAB2Q7Z6G3 386 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 DCBLD1Q8N8Z6 715 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 FAM156AQ8NDB6 213 aa16.39■□□□□ 0.21
SCAF1-201ENST00000360565 PTCD2Q8WV60 388 aaKnown RBP16.39■□□□□ 0.21
SCAF1-201ENST00000360565 HMX1Q9NP08 348 aaPredicted RBP16.39■□□□□ 0.21
SCAF1-201ENST00000360565 NEMP2A6NFY4 417 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 TIPRLO75663 272 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 IRF9Q00978 393 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 RUNX1T1Q06455 604 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 CAMK2GQ13555 558 aaPredicted RBP16.38■□□□□ 0.21
SCAF1-201ENST00000360565 HEXDCQ8WVB3 486 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.38■□□□□ 0.21
SCAF1-201ENST00000360565 MFHAS1Q9Y4C4 1052 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 AK5Q9Y6K8 562 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 C1orf232A0A0U1RR37 186 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 LIN7AO14910 233 aaPredicted RBP16.38■□□□□ 0.21
SCAF1-201ENST00000360565 AHCYL1O43865 530 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 SP100P23497 879 aaPredicted RBP16.38■□□□□ 0.21
SCAF1-201ENST00000360565 ROR2Q01974 943 aaKnown RBP16.38■□□□□ 0.21
SCAF1-201ENST00000360565 TMEM198Q66K66 360 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 RBM44Q6ZP01 1051 aaKnown RBP16.38■□□□□ 0.21
SCAF1-201ENST00000360565 ANKS3Q6ZW76 656 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 PATL1Q86TB9 770 aaKnown RBP16.38■□□□□ 0.21
SCAF1-201ENST00000360565 PGAM4Q8N0Y7 254 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 LPGAT1Q92604 370 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 CIB1Q99828 191 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 TXLNGYQ9BZA5 131 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 TIMM22Q9Y584 194 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 ABLIM1O14639 778 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 ALOX15P16050 662 aaPredicted RBP16.38■□□□□ 0.21
SCAF1-201ENST00000360565 MC4RP32245 332 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 OR1D2P34982 312 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 CHI3L1P36222 383 aaPredicted RBP16.38■□□□□ 0.21
SCAF1-201ENST00000360565 RPL38P63173 70 aaKnown RBP16.38■□□□□ 0.21
SCAF1-201ENST00000360565 FKBP1BP68106 108 aa16.38■□□□□ 0.21
SCAF1-201ENST00000360565 XIAPP98170 497 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms