RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 DHCR24Q15392 516 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 PDK4Q16654 411 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 TTC19Q6DKK2 380 aaPredicted RBP13.56□□□□□ -0.24
CCDC197-201ENST00000359253 MRNIPQ6NTE8 343 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 CPLX4Q7Z7G2 160 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 TAX1BP1Q86VP1 789 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 SPATS2Q86XZ4 545 aaKnown RBP13.56□□□□□ -0.24
CCDC197-201ENST00000359253 NPAS3Q8IXF0 933 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 ING5Q8WYH8 240 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 ZNF778Q96MU6 729 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 ZNF317Q96PQ6 595 aaPredicted RBP13.56□□□□□ -0.24
CCDC197-201ENST00000359253 CCT8L2Q96SF2 557 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 UHRF1Q96T88 793 aaPredicted RBP13.56□□□□□ -0.24
CCDC197-201ENST00000359253 GPR22Q99680 433 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 LINC00597Q9H2U6 94 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 UGT1A7Q9HAW7 530 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 UGT1A10Q9HAW8 530 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 UGT1A8Q9HAW9 530 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 MAGEE1Q9HCI5 957 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 NLE1Q9NVX2 485 aaPredicted RBP13.56□□□□□ -0.24
CCDC197-201ENST00000359253 CHKBQ9Y259 395 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 VPS9D1Q9Y2B5 631 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 ANKRD6Q9Y2G4 727 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 SLC27A6Q9Y2P4 619 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 PLLPQ9Y342 182 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 PGLSO95336 258 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 POP4O95707 220 aaKnown RBP13.55□□□□□ -0.24
CCDC197-201ENST00000359253 ATP5BP06576 529 aaKnown RBP13.55□□□□□ -0.24
CCDC197-201ENST00000359253 DHRS4L1P0CG22 281 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 SRCP12931 536 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 POLR2EP19388 210 aaKnown RBP13.55□□□□□ -0.24
CCDC197-201ENST00000359253 OGNP20774 298 aaKnown RBP13.55□□□□□ -0.24
CCDC197-201ENST00000359253 LPOP22079 712 aaPredicted RBP13.55□□□□□ -0.24
CCDC197-201ENST00000359253 ARNTP27540 789 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 SERPINA4P29622 427 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 LEPRP48357 1165 aaKnown RBP13.55□□□□□ -0.24
CCDC197-201ENST00000359253 CD151P48509 253 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 EPHB1P54762 984 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 WDR4P57081 412 aaKnown RBP13.55□□□□□ -0.24
CCDC197-201ENST00000359253 E2F5Q15329 346 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 EML3Q32P44 896 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 PREPLQ4J6C6 727 aaPredicted RBP13.55□□□□□ -0.24
CCDC197-201ENST00000359253 FSTL4Q6MZW2 842 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 LVRNQ6Q4G3 990 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 ZNF771Q7L3S4 317 aaPredicted RBP13.55□□□□□ -0.24
CCDC197-201ENST00000359253 GLT6D1Q7Z4J2 308 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 SDCCAG8Q86SQ7 713 aaPredicted RBP13.55□□□□□ -0.24
CCDC197-201ENST00000359253 ZC3HC1Q86WB0 502 aaKnown RBP13.55□□□□□ -0.24
CCDC197-201ENST00000359253 KDM1BQ8NB78 822 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 OR13J1Q8NGT2 312 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 RIN3Q8TB24 985 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 RAB3IL1Q8TBN0 382 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 MGARPQ8TDB4 240 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 BLOC1S5Q8TDH9 187 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 FGF13Q92913 245 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 BHMTQ93088 406 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 VPS39Q96JC1 886 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 ZNF641Q96N77 438 aaPredicted RBP13.55□□□□□ -0.24
CCDC197-201ENST00000359253 TCF12Q99081 682 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 AGAP2Q99490 1192 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 FBXO5Q9UKT4 447 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 CLEC4EQ9ULY5 219 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 FCF1Q9Y324 198 aaKnown RBP13.55□□□□□ -0.24
CCDC197-201ENST00000359253 ACTL7AQ9Y615 435 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 PSAT1Q9Y617 370 aa13.55□□□□□ -0.24
CCDC197-201ENST00000359253 UNC80Q8N2C7 3258 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 TTC24A2A3L6 582 aaPredicted RBP13.54□□□□□ -0.24
CCDC197-201ENST00000359253 FOXO6A8MYZ6 492 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 WASH3PC4AMC7 463 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 H7C0S8 307 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 BIRC5O15392 142 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 MT-CO1P00395 513 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 AHSGP02765 367 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 ALDOAP04075 364 aaKnown RBP13.54□□□□□ -0.24
CCDC197-201ENST00000359253 ADH5P11766 374 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 CRABP2P29373 138 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 ETV4P43268 484 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 CLCN5P51795 746 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 PTPN5P54829 565 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 POLR2LP62875 67 aaKnown RBP13.54□□□□□ -0.24
CCDC197-201ENST00000359253 POU4F1Q01851 419 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 TRAF2Q12933 501 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 BMPR2Q13873 1038 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 GALNT3Q14435 633 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 QPCTQ16769 361 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 MYLK3Q32MK0 819 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 CCDC153Q494R4 210 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 FUT11Q495W5 492 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 CARD16Q5EG05 197 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 FAM78AQ5JUQ0 283 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 MBLAC2Q68D91 279 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 DCLK2Q8N568 766 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 HCAR2Q8TDS4 363 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 LRRC8CQ8TDW0 803 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 HDAC10Q969S8 669 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 TSPAN17Q96FV3 270 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 MYO19Q96H55 970 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 LRIG1Q96JA1 1093 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 EXOC2Q96KP1 924 aa13.54□□□□□ -0.24
CCDC197-201ENST00000359253 ZFP14Q9HCL3 533 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms