RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 PRKD3O94806 890 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 NDUFB10O96000 172 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 FGFR1P11362 822 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF24P17028 368 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 PTPN21Q16825 1174 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 GALNTL6Q49A17 601 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 MARC1Q5VT66 337 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 C7orf57Q8NEG2 295 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 DNAJB3Q8WWF6 145 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 ATG4AQ8WYN0 398 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 SPATA9Q9BWV2 254 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 FAM196BA6NMK8 535 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 ZBTB11O95625 1053 aaPredicted RBP6.6□□□□□ -1.35
VPS13B-202ENST00000357162 ITGA2BP08514 1039 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 MPZL3Q6UWV2 235 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 ARHGAP36Q6ZRI8 547 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 KAT2BQ92831 832 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 WRNIP1Q96S55 665 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 RPS6KB2Q9UBS0 482 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 ZMYM5Q9UJ78 669 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 TMEM59LQ9UK28 342 aa6.6□□□□□ -1.35
VPS13B-202ENST00000357162 LOC100506127A0A0U1RQW1 187 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 TOP3BO95985 862 aaKnown RBP6.59□□□□□ -1.35
VPS13B-202ENST00000357162 ZYXQ15942 572 aaKnown RBP6.59□□□□□ -1.35
VPS13B-202ENST00000357162 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.59□□□□□ -1.35
VPS13B-202ENST00000357162 GPRIN3Q6ZVF9 776 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 APOL5Q9BWW9 433 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF624Q9P2J8 865 aaPredicted RBP6.59□□□□□ -1.35
VPS13B-202ENST00000357162 OPTCQ9UBM4 332 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 PDE10AQ9Y233 779 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 PRR36Q9H6K5 1346 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 ZC3H4Q9UPT8 1303 aaKnown RBP6.59□□□□□ -1.35
VPS13B-202ENST00000357162 ABCA7Q8IZY2 2146 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 TPST1O60507 370 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 FGRP09769 529 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 NTSP30990 170 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 SEC14L1Q92503 715 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 IL1RL2Q9HB29 575 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 CCDC177Q9NQR7 707 aaPredicted RBP6.59□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF358Q9NW07 568 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 FAM240BA0A1B0GVZ2 78 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 HMGN1P05114 100 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 PRDX5P30044 214 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 RPA3P35244 121 aaPredicted RBP6.59□□□□□ -1.35
VPS13B-202ENST00000357162 PITRM1Q5JRX3 1037 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 KCNT2Q6UVM3 1135 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 METTL6Q8TCB7 284 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 AAASQ9NRG9 546 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 DPPA5A6NC42 116 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 NADKO95544 446 aaPredicted RBP6.59□□□□□ -1.35
VPS13B-202ENST00000357162 ARL10Q8N8L6 244 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 WNT8BQ93098 351 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 NMUR2Q9GZQ4 415 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 PCDH10Q9P2E7 1040 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 GNEQ9Y223 722 aaKnown RBP6.59□□□□□ -1.35
VPS13B-202ENST00000357162 TEX28O15482 410 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 TRIM3O75382 744 aaPredicted RBP6.59□□□□□ -1.35
VPS13B-202ENST00000357162 SRSF11Q05519 484 aaKnown RBP6.59□□□□□ -1.35
VPS13B-202ENST00000357162 NKX1-1Q15270 411 aaPredicted RBP6.59□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF57Q68EA5 555 aaPredicted RBP6.59□□□□□ -1.35
VPS13B-202ENST00000357162 ANO7Q6IWH7 933 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 PYHIN1Q6K0P9 492 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 USP49Q70CQ1 688 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 OFCC1Q8IZS5 231 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 SLC5A5Q92911 643 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 MYO19Q96H55 970 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 POPDC2Q9HBU9 364 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 VPS4AQ9UN37 437 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 DAGLAQ9Y4D2 1042 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 FAM47E-STBD1D6RA91 191 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 BCAS2O75934 225 aaPredicted RBP6.59□□□□□ -1.35
VPS13B-202ENST00000357162 SERPINA3P01011 423 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 GH1P01241 217 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 TBC1D10BQ4KMP7 808 aaPredicted RBP6.59□□□□□ -1.35
VPS13B-202ENST00000357162 BANPQ8N9N5 519 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 FAM208AQ9UK61 1670 aaKnown RBP6.59□□□□□ -1.35
VPS13B-202ENST00000357162 NOTCH2Q04721 2471 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 SCN1AP35498 2009 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 FTH1P02794 183 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 ANXA8P13928 327 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 MAPK3P27361 379 aaPredicted RBP6.59□□□□□ -1.35
VPS13B-202ENST00000357162 HUNKP57058 714 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 SLC6A3Q01959 620 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 TMEM132BQ14DG7 1078 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 GOLGA7BQ2TAP0 167 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 PLCZ1Q86YW0 608 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 RBM15BQ8NDT2 890 aaKnown RBP6.59□□□□□ -1.35
VPS13B-202ENST00000357162 CALML5Q9NZT1 146 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 RORCP51449 518 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 CBLBQ13191 982 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 CNPY1Q3B7I2 92 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 ATP13A4Q4VNC1 1196 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 SLC9A4Q6AI14 798 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 ABCB10Q9NRK6 738 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 NR2C1P13056 603 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 GNAZP19086 355 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 MMP8P22894 467 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 GLDCP23378 1020 aa6.59□□□□□ -1.35
VPS13B-202ENST00000357162 HNRNPFP52597 415 aaKnown RBP6.59□□□□□ -1.35
VPS13B-202ENST00000357162 ACCSLQ4AC99 568 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms