RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 FNBP1LQ5T0N5 605 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 CNSTQ6PJW8 725 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 CRTC3Q6UUV7 619 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 ZNF540Q8NDQ6 660 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 OR4A15Q8NGL6 344 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 GSDMCQ9BYG8 508 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 GIT1Q9Y2X7 761 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 GNB5O14775 395 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 SIN3BO75182 1162 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 GIMD1P0DJR0 217 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 TFPIP10646 304 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 CYP4B1P13584 511 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 CDC25CP30307 473 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 PTPN11Q06124 597 aaPredicted RBP11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 DLG1Q12959 904 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 GRB10Q13322 594 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 MPPE1Q53F39 396 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 DEF8Q6ZN54 512 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 C12orf56Q8IXR9 622 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 PM20D2Q8IYS1 436 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 CCDC54Q8NEL0 328 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 ATL1Q8WXF7 558 aa11.55□□□□□ -0.56
SPTBN1-202ENST00000356805 M0QX08 132 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 MED24O75448 989 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 ITPKBP27987 946 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 SERPINA4P29622 427 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 GRIK4Q16099 956 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 ZNF549Q6P9A3 640 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 HHIPL2Q6UWX4 724 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 GPN1Q9HCN4 374 aaPredicted RBP11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 MGAT4AQ9UM21 535 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 ITGAVP06756 1048 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 DBTP11182 482 aaKnown RBP11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 UGT2B15P54855 530 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 RNF220Q5VTB9 566 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 CCDC115Q96NT0 180 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 SPATA5L1Q9BVQ7 753 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 TMEM165Q9HC07 324 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 VIRMAQ69YN4 1812 aaKnown RBP11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 TRIM64A6NGJ6 449 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 PSMD9O00233 223 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 SLC28A2O43868 658 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 UGT2B11O75310 529 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 RASA1P20936 1047 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 MAGEA8P43361 318 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 CLCN2P51788 898 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 MBTD1Q05BQ5 628 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 PPP1R13LQ8WUF5 828 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 SLC5A5Q92911 643 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 EXOC2Q96KP1 924 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 DNAJC18Q9H819 358 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 MAGEL2Q9UJ55 1249 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 TBC1D24Q9ULP9 559 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 GLI2P10070 1586 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 LRATO95237 230 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 IL1BP01584 269 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 SWI5Q1ZZU3 235 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 XKR6Q5GH73 641 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 CES5AQ6NT32 575 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 CERKQ8TCT0 537 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 KCNS3Q9BQ31 491 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 SYNPO2Q9UMS6 1093 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 PCDHB9Q9Y5E1 797 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 OR10H3O60404 316 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 TOP3BO95985 862 aaKnown RBP11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 CD86P42081 329 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 PEX5LQ8IYB4 626 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 FAIM2Q9BWQ8 316 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 OAFQ86UD1 273 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 ERI1Q8IV48 349 aaKnown RBP11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 ZBTB8BQ8NAP8 495 aaPredicted RBP11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 DNAJB14Q8TBM8 379 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 FNDC11Q9BVV2 318 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 IL22Q9GZX6 179 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 ABCG4Q9H172 646 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 NOL11Q9H8H0 719 aaKnown RBP11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 CKLFQ9UBR5 152 aa11.54□□□□□ -0.56
SPTBN1-202ENST00000356805 TRAV19A0A0A6YYK7 116 aa11.53□□□□□ -0.56
SPTBN1-202ENST00000356805 KLHL33A6NCF5 533 aa11.53□□□□□ -0.56
SPTBN1-202ENST00000356805 ETS2P15036 469 aa11.53□□□□□ -0.56
SPTBN1-202ENST00000356805 SSTR1P30872 391 aa11.53□□□□□ -0.56
SPTBN1-202ENST00000356805 ARHGAP36Q6ZRI8 547 aa11.53□□□□□ -0.56
SPTBN1-202ENST00000356805 NELL1Q92832 810 aa11.53□□□□□ -0.56
SPTBN1-202ENST00000356805 SP140LQ9H930 580 aa11.53□□□□□ -0.56
SPTBN1-202ENST00000356805 CD320Q9NPF0 282 aa11.53□□□□□ -0.56
SPTBN1-202ENST00000356805 TNS3Q68CZ2 1445 aa11.53□□□□□ -0.56
SPTBN1-202ENST00000356805 SLC22A2O15244 555 aa11.53□□□□□ -0.56
SPTBN1-202ENST00000356805 AVILO75366 819 aa11.53□□□□□ -0.56
SPTBN1-202ENST00000356805 THRBP10828 461 aa11.53□□□□□ -0.56
SPTBN1-202ENST00000356805 RPL3P39023 403 aaKnown RBP11.53□□□□□ -0.56
SPTBN1-202ENST00000356805 USP41Q3LFD5 358 aa11.53□□□□□ -0.56
SPTBN1-202ENST00000356805 TBC1D25Q3MII6 688 aa11.53□□□□□ -0.56
SPTBN1-202ENST00000356805 PPP1R26Q5T8A7 1209 aaPredicted RBP11.53□□□□□ -0.56
SPTBN1-202ENST00000356805 LZTR1Q8N653 840 aa11.53□□□□□ -0.56
SPTBN1-202ENST00000356805 FAM47BQ8NA70 645 aa11.53□□□□□ -0.56
SPTBN1-202ENST00000356805 DRAXINQ8NBI3 349 aaPredicted RBP11.53□□□□□ -0.56
SPTBN1-202ENST00000356805 JSRP1Q96MG2 331 aaPredicted RBP11.53□□□□□ -0.56
SPTBN1-202ENST00000356805 SERPINB11Q96P15 392 aa11.53□□□□□ -0.56
SPTBN1-202ENST00000356805 GPATCH1Q9BRR8 931 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms