RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 UGT1A8Q9HAW9 530 aa18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 ZDHHC4Q9NPG8 344 aa18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 TRPV5Q9NQA5 729 aa18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 SLC17A6Q9P2U8 582 aa18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 ZNF180Q9UJW8 692 aa18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 SLC8A2Q9UPR5 921 aa18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 ARL5AQ9Y689 179 aa18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 WASF2Q9Y6W5 498 aa18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 F5P12259 2224 aa18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 ATG2BQ96BY7 2078 aa18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 SPECC1L-ADORA2AF8WAN1 911 aa18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 UGT2B4P06133 528 aa18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 CTSLP07711 333 aa18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 HPDP32754 393 aaPredicted RBP18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 CTHP32929 405 aa18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 RECQLP46063 649 aaPredicted RBP18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 RPL26P61254 145 aaKnown RBP18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 PPP2R2AP63151 447 aa18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 NAB1Q13506 487 aa18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 TMED2Q15363 201 aa18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 CNGA3Q16281 694 aa18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 IER5LQ5T953 404 aa18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 EGFLAMQ63HQ2 1017 aa18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 PPM1NQ8N819 430 aa18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 OR13J1Q8NGT2 312 aa18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 GRIN3AQ8TCU5 1115 aa18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 ACOX2Q99424 681 aa18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 P2RY13Q9BPV8 354 aa18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 HEPHQ9BQS7 1158 aa18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 THAP10Q9P2Z0 257 aaPredicted RBP18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 RPL26L1Q9UNX3 145 aaKnown RBP18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 IKBKGQ9Y6K9 419 aa18.23■□□□□ 0.51
SMARCD3-202ENST00000356800 A0A0U1RQS6 177 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 FOXO6A8MYZ6 492 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 BUD23O43709 281 aaKnown RBP18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 FAM155BO75949 473 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 PAPSS2O95340 614 aaPredicted RBP18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 INHBAP08476 426 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 CTPS1P17812 591 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 ABL2P42684 1182 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 GRIA4P48058 902 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 ARCN1P48444 511 aaKnown RBP18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 TFF2Q03403 129 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 RAD51Q06609 339 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 MGAT5Q09328 741 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 PTPRCAPQ14761 206 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 HNRNPA1L2Q32P51 320 aaKnown RBP18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 CTAGE3PQ8IX95 158 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 CNPY4Q8N129 248 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 ZNF641Q96N77 438 aaPredicted RBP18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 PPANQ9NQ55 473 aaKnown RBP18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 SENP1Q9P0U3 644 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 SCN8AQ9UQD0 1980 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 K7EQS6 105 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 NARSO43776 548 aaKnown RBP18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 LEFTY1O75610 366 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 ALPIP09923 528 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 CHRM1P11229 460 aaPredicted RBP18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 IL12RB1P42701 662 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 ARSDP51689 593 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 EPHB1P54762 984 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 GRM3Q14832 879 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 PREPLQ4J6C6 727 aaPredicted RBP18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 C9orf64Q5T6V5 341 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 KIAA0930Q6ICG6 404 aaPredicted RBP18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 GDPD4Q6W3E5 623 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 TRABD2AQ86V40 505 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 TTC30BQ8N4P2 665 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 UCMAQ8WVF2 138 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 CDKL2Q92772 493 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 CNOT10Q9H9A5 744 aaKnown RBP18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 HEBP1Q9NRV9 189 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 C20orf96Q9NUD7 363 aaPredicted RBP18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 STARD13Q9Y3M8 1113 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 PSAT1Q9Y617 370 aa18.22■□□□□ 0.51
SMARCD3-202ENST00000356800 A0A0J9YYE9 177 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 EDDM13A0A1B0GTR0 161 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 A6NNZ2 444 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 GOLGA8TH3BQL2 631 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 CCL22O00626 93 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 VAPBO95292 243 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 TRBC1P01850 177 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 IL9P15248 144 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 ZNF140P52738 457 aaPredicted RBP18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 ACVR1Q04771 509 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 TAF1AQ15573 450 aaPredicted RBP18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 TUBB8Q3ZCM7 444 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 HSP90AA5PQ58FG0 334 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 ARSIQ5FYB1 569 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 SERPINA13PQ6UXR4 307 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 MARK2Q7KZI7 788 aaKnown RBP18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 NLRP9Q7RTR0 991 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 KCNMB4Q86W47 210 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 RASSF3Q86WH2 238 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 MZB1Q8WU39 189 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 SPOCK2Q92563 424 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 DNASE1L2Q92874 299 aa18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 DNAJC1Q96KC8 554 aaKnown RBP18.21■□□□□ 0.51
SMARCD3-202ENST00000356800 KLHL32Q96NJ5 620 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms