RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 ATXN7L3BQ96GX2 97 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 WDR92Q96MX6 357 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 BBC3Q96PG8 261 aaPredicted RBP10.73□□□□□ -0.69
CAPN3-204ENST00000356316 CCDC3Q9BQI4 270 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 BPIFA3Q9BQP9 254 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 SNRNP25Q9BV90 132 aaKnown RBP10.73□□□□□ -0.69
CAPN3-204ENST00000356316 CLPBQ9H078 707 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 HSD3B7Q9H2F3 369 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 PDFQ9HBH1 243 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 AIPL1Q9NZN9 384 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 SIRPGQ9P1W8 387 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 MYO1AQ9UBC5 1043 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 KLQ9UEF7 1012 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 CNOT8Q9UFF9 292 aaKnown RBP10.73□□□□□ -0.69
CAPN3-204ENST00000356316 GPR34Q9UPC5 381 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 ATP8A1Q9Y2Q0 1164 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 OR1A2Q9Y585 309 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 ATRXP46100 2492 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 ANKRD36A6QL64 1941 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 LRRK1Q38SD2 2015 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.72□□□□□ -0.69
CAPN3-204ENST00000356316 A0A1W2PQ67 120 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 A8MX80 341 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 H3BRJ5 948 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 PDE2AO00408 941 aaPredicted RBP10.72□□□□□ -0.69
CAPN3-204ENST00000356316 ATXN7O15265 892 aaPredicted RBP10.72□□□□□ -0.69
CAPN3-204ENST00000356316 ELFN1P0C7U0 828 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 MYBL1P10243 752 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 HOXB1P14653 301 aaPredicted RBP10.72□□□□□ -0.69
CAPN3-204ENST00000356316 ARL4AP40617 200 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 TPM4P67936 248 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 MTM1Q13496 603 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 ACOX1Q15067 660 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 AGERQ15109 404 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 TCEA2Q15560 299 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 CA9Q16790 459 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 ALG11Q2TAA5 492 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 BOLA3Q53S33 107 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 PERM1Q5SV97 790 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 TMCO4Q5TGY1 634 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 BBS5Q8N3I7 341 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 WDR36Q8NI36 951 aaKnown RBP10.72□□□□□ -0.69
CAPN3-204ENST00000356316 FNIP1Q8TF40 1166 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 NSMCE1Q8WV22 266 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 ZNF653Q96CK0 615 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 HIC2Q96JB3 615 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 SLC46A1Q96NT5 459 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 KCTD15Q96SI1 283 aaPredicted RBP10.72□□□□□ -0.69
CAPN3-204ENST00000356316 STRADBQ9C0K7 418 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 SEPT3Q9UH03 358 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 MOSPD1Q9UJG1 213 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 PCDHGA8Q9Y5G5 932 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 ENTPD2Q9Y5L3 495 aa10.72□□□□□ -0.69
CAPN3-204ENST00000356316 BAHCC1Q9P281 2608 aa10.71□□□□□ -0.69
CAPN3-204ENST00000356316 A0A1W2PQC6 194 aa10.71□□□□□ -0.69
CAPN3-204ENST00000356316 RECQL5O94762 991 aaPredicted RBP10.71□□□□□ -0.69
CAPN3-204ENST00000356316 TNFSF15O95150 251 aa10.71□□□□□ -0.69
CAPN3-204ENST00000356316 PRKCGP05129 697 aa10.71□□□□□ -0.69
CAPN3-204ENST00000356316 MMP12P39900 470 aa10.71□□□□□ -0.69
CAPN3-204ENST00000356316 PRKCIP41743 596 aa10.71□□□□□ -0.69
CAPN3-204ENST00000356316 ZNF165P49910 485 aa10.71□□□□□ -0.69
CAPN3-204ENST00000356316 AP1S1P61966 158 aa10.71□□□□□ -0.69
CAPN3-204ENST00000356316 ZNF235Q14590 738 aa10.71□□□□□ -0.69
CAPN3-204ENST00000356316 LBRQ14739 615 aaKnown RBP10.71□□□□□ -0.69
CAPN3-204ENST00000356316 TSR1Q2NL82 804 aaKnown RBP10.71□□□□□ -0.69
CAPN3-204ENST00000356316 TAF1BQ53T94 588 aaPredicted RBP10.71□□□□□ -0.69
CAPN3-204ENST00000356316 AFMIDQ63HM1 303 aa10.71□□□□□ -0.69
CAPN3-204ENST00000356316 IGF2-ASQ6U949 168 aa10.71□□□□□ -0.69
CAPN3-204ENST00000356316 TMCO3Q6UWJ1 677 aa10.71□□□□□ -0.69
CAPN3-204ENST00000356316 ZNF571Q7Z3V5 609 aaPredicted RBP10.71□□□□□ -0.69
CAPN3-204ENST00000356316 TAF8Q7Z7C8 310 aa10.71□□□□□ -0.69
CAPN3-204ENST00000356316 FAM46DQ8NEK8 389 aa10.71□□□□□ -0.69
CAPN3-204ENST00000356316 OR56A4Q8NGH8 313 aa10.71□□□□□ -0.69
CAPN3-204ENST00000356316 PCDH19Q8TAB3 1148 aa10.71□□□□□ -0.69
CAPN3-204ENST00000356316 PDCD6IPQ8WUM4 868 aaKnown RBP10.71□□□□□ -0.69
CAPN3-204ENST00000356316 ZNF599Q96NL3 588 aa10.71□□□□□ -0.69
CAPN3-204ENST00000356316 PSKH2Q96QS6 385 aa10.71□□□□□ -0.69
CAPN3-204ENST00000356316 GFM1Q96RP9 751 aaKnown RBP10.71□□□□□ -0.69
CAPN3-204ENST00000356316 SYT11Q9BT88 431 aa10.71□□□□□ -0.69
CAPN3-204ENST00000356316 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.71□□□□□ -0.69
CAPN3-204ENST00000356316 WDR70Q9NW82 654 aa10.71□□□□□ -0.69
CAPN3-204ENST00000356316 KCTD5Q9NXV2 234 aa10.71□□□□□ -0.69
CAPN3-204ENST00000356316 CWC15Q9P013 229 aaKnown RBP10.71□□□□□ -0.69
CAPN3-204ENST00000356316 PNMA8BQ9ULN7 279 aaPredicted RBP10.71□□□□□ -0.69
CAPN3-204ENST00000356316 BZW2Q9Y6E2 419 aaKnown RBP10.71□□□□□ -0.69
CAPN3-204ENST00000356316 KALRNO60229 2985 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 CCDC187A0A096LP49 1063 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 CAPN8A6NHC0 703 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 ZW10O43264 779 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 LRCH4O75427 683 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 CELA2BP08218 269 aaPredicted RBP10.7□□□□□ -0.7
CAPN3-204ENST00000356316 HOXC4P09017 264 aaPredicted RBP10.7□□□□□ -0.7
CAPN3-204ENST00000356316 SKILP12757 684 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 KRT10P13645 584 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 PCK1P35558 622 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 HSPA9P38646 679 aaKnown RBP10.7□□□□□ -0.7
CAPN3-204ENST00000356316 MLLT3P42568 568 aaPredicted RBP10.7□□□□□ -0.7
CAPN3-204ENST00000356316 RGRP47804 291 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 SLC10A7Q0GE19 358 aa10.7□□□□□ -0.7
CAPN3-204ENST00000356316 ARHGEF7Q14155 803 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms