RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 SDCCAG3Q96C92 435 aa13.67□□□□□ -0.22
TRIM4-203ENST00000355947 RANBP9Q96S59 729 aa13.67□□□□□ -0.22
TRIM4-203ENST00000355947 HERC2P3Q9BVR0 1158 aa13.67□□□□□ -0.22
TRIM4-203ENST00000355947 ASB7Q9H672 318 aa13.67□□□□□ -0.22
TRIM4-203ENST00000355947 WDCPQ9H6R7 721 aa13.67□□□□□ -0.22
TRIM4-203ENST00000355947 WDR70Q9NW82 654 aa13.67□□□□□ -0.22
TRIM4-203ENST00000355947 AASSQ9UDR5 926 aa13.67□□□□□ -0.22
TRIM4-203ENST00000355947 PIN4Q9Y237 131 aaKnown RBP13.67□□□□□ -0.22
TRIM4-203ENST00000355947 NOBOXO60393 691 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 CBFA2T3O75081 653 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 H2AFYO75367 372 aaKnown RBP13.66□□□□□ -0.22
TRIM4-203ENST00000355947 RECQL4O94761 1208 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 FAM163BP0C2L3 166 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 GRM1Q13255 1194 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 LAPTM5Q13571 262 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 GRB7Q14451 532 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 SQLEQ14534 574 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 CCDC92Q53HC0 331 aaPredicted RBP13.66□□□□□ -0.22
TRIM4-203ENST00000355947 NEPROQ6NW34 567 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 ABRAXAS1Q6UWZ7 409 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 LYSMD3Q7Z3D4 306 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 TFAP2DQ7Z6R9 452 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 MFSD6LQ8IWD5 586 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 ANKRD52Q8NB46 1076 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 TAMM41Q96BW9 452 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 NSUN5Q96P11 429 aaKnown RBP13.66□□□□□ -0.22
TRIM4-203ENST00000355947 IL22Q9GZX6 179 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 HIPK3Q9H422 1215 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 SMARCAD1Q9H4L7 1026 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 IFT80Q9P2H3 777 aaPredicted RBP13.66□□□□□ -0.22
TRIM4-203ENST00000355947 PNMA8BQ9ULN7 279 aaPredicted RBP13.66□□□□□ -0.22
TRIM4-203ENST00000355947 NDUFAF1Q9Y375 327 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 GOLGA8CPA6NN73 597 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 A8MT66 165 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 ESRRBO95718 433 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 NKX2-5P52952 324 aaPredicted RBP13.66□□□□□ -0.22
TRIM4-203ENST00000355947 SLC25A52Q3SY17 297 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 FBXO47Q5MNV8 452 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 PIWIL4Q7Z3Z4 852 aaKnown RBP13.66□□□□□ -0.22
TRIM4-203ENST00000355947 FBXO30Q8TB52 745 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 GPR22Q99680 433 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 KCTD14Q9BQ13 255 aaPredicted RBP13.66□□□□□ -0.22
TRIM4-203ENST00000355947 TBC1D13Q9NVG8 400 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 RBM22Q9NW64 420 aaKnown RBP eCLIP13.66□□□□□ -0.229e-6■□□□□ 9.6
TRIM4-203ENST00000355947 ZBTB42B2RXF5 422 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 HBP1O60381 514 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 E2F6O75461 281 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 ADRA1BP35368 520 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 GGT5P36269 586 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 PTPN9P43378 593 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 IREB2P48200 963 aaKnown RBP13.66□□□□□ -0.22
TRIM4-203ENST00000355947 BCAP31P51572 246 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 DIO3P55073 304 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 TXNL4AP83876 142 aaKnown RBP13.66□□□□□ -0.22
TRIM4-203ENST00000355947 OCA2Q04671 838 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 TSTD2Q5T7W7 516 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 TMEM135Q86UB9 458 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 ATPAF2Q8N5M1 289 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 HASPINQ8TF76 798 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 WNT8BQ93098 351 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 MUS81Q96NY9 551 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 TBCDQ9BTW9 1192 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 SLC2A11Q9BYW1 496 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 BRD8Q9H0E9 1235 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 EML4Q9HC35 981 aaKnown RBP13.66□□□□□ -0.22
TRIM4-203ENST00000355947 MRPL40Q9NQ50 206 aaKnown RBP13.66□□□□□ -0.22
TRIM4-203ENST00000355947 KIAA1257Q9ULG3 409 aa13.66□□□□□ -0.22
TRIM4-203ENST00000355947 NUP214P35658 2090 aaPredicted RBP13.66□□□□□ -0.22
TRIM4-203ENST00000355947 LOXHD1Q8IVV2 1947 aa13.65□□□□□ -0.22
TRIM4-203ENST00000355947 DPYSL4O14531 572 aa13.65□□□□□ -0.22
TRIM4-203ENST00000355947 ALDH3B2P48448 385 aa13.65□□□□□ -0.22
TRIM4-203ENST00000355947 PCYT1AP49585 367 aa13.65□□□□□ -0.22
TRIM4-203ENST00000355947 NRG1Q02297 640 aaPredicted RBP13.65□□□□□ -0.22
TRIM4-203ENST00000355947 DMPKQ09013 629 aa13.65□□□□□ -0.22
TRIM4-203ENST00000355947 NAB1Q13506 487 aa13.65□□□□□ -0.22
TRIM4-203ENST00000355947 WSCD1Q658N2 575 aa13.65□□□□□ -0.22
TRIM4-203ENST00000355947 TMEM53Q6P2H8 277 aa13.65□□□□□ -0.22
TRIM4-203ENST00000355947 Q6ZNX1 250 aa13.65□□□□□ -0.22
TRIM4-203ENST00000355947 DCDC5Q6ZRR9 648 aa13.65□□□□□ -0.22
TRIM4-203ENST00000355947 PTGR2Q8N8N7 351 aaPredicted RBP13.65□□□□□ -0.22
TRIM4-203ENST00000355947 SMG8Q8ND04 991 aaKnown RBP13.65□□□□□ -0.22
TRIM4-203ENST00000355947 TNIP2Q8NFZ5 429 aa13.65□□□□□ -0.22
TRIM4-203ENST00000355947 PPM1MQ96MI6 270 aa13.65□□□□□ -0.22
TRIM4-203ENST00000355947 NPLQ9BXD5 320 aaPredicted RBP13.65□□□□□ -0.22
TRIM4-203ENST00000355947 AKTIPQ9H8T0 292 aa13.65□□□□□ -0.22
TRIM4-203ENST00000355947 SUCOQ9UBS9 1254 aaKnown RBP13.65□□□□□ -0.22
TRIM4-203ENST00000355947 TMA7Q9Y2S6 64 aaKnown RBP13.65□□□□□ -0.22
TRIM4-203ENST00000355947 PIP5K1BO14986 540 aa13.65□□□□□ -0.22
TRIM4-203ENST00000355947 MATN1P21941 496 aa13.65□□□□□ -0.22
TRIM4-203ENST00000355947 FRG1Q14331 258 aaKnown RBP13.65□□□□□ -0.22
TRIM4-203ENST00000355947 UGP2Q16851 508 aa13.65□□□□□ -0.22
TRIM4-203ENST00000355947 NHSL2Q5HYW2 709 aa13.65□□□□□ -0.22
TRIM4-203ENST00000355947 ERMP1Q7Z2K6 904 aa13.65□□□□□ -0.22
TRIM4-203ENST00000355947 HEATR4Q86WZ0 1026 aa13.65□□□□□ -0.22
TRIM4-203ENST00000355947 HS3ST5Q8IZT8 346 aa13.65□□□□□ -0.22
TRIM4-203ENST00000355947 TFAP2CQ92754 450 aa13.65□□□□□ -0.22
TRIM4-203ENST00000355947 KLHL5Q96PQ7 755 aa13.65□□□□□ -0.22
TRIM4-203ENST00000355947 PPP1R10Q96QC0 940 aaKnown RBP13.65□□□□□ -0.22
TRIM4-203ENST00000355947 RNF39Q9H2S5 420 aa13.65□□□□□ -0.22
TRIM4-203ENST00000355947 MARCH7Q9H992 704 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms