RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 OSTM1Q86WC4 334 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 DNAAF5Q86Y56 855 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 LURAP1LQ8IV03 231 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 DCP1BQ8IZD4 617 aaKnown RBP7.13□□□□□ -1.27
VPS13A-201ENST00000355766 SIX6OS1Q8N1H7 587 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 ZNF843Q8N446 348 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 MREGQ8N565 214 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 CCDC33Q8N5R6 958 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 C12orf29Q8N999 325 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 LSM14AQ8ND56 463 aaKnown RBP7.13□□□□□ -1.27
VPS13A-201ENST00000355766 OR10T2Q8NGX3 314 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 PIP4K2CQ8TBX8 421 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 FAM71BQ8TC56 605 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 GIPC2Q8TF65 315 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 MRPS31Q92665 395 aaKnown RBP7.13□□□□□ -1.27
VPS13A-201ENST00000355766 CAVIN3Q969G5 261 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 NT5C3BQ969T7 300 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 PGAP3Q96FM1 320 aaPredicted RBP7.13□□□□□ -1.27
VPS13A-201ENST00000355766 SLC2A13Q96QE2 648 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 PSMB7Q99436 277 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 ZNF670Q9BS34 389 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 KRTAP4-11Q9BYQ6 195 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 OSBPL8Q9BZF1 889 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 ACBD3Q9H3P7 528 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 DPEP3Q9H4B8 488 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 LRRC4Q9HBW1 653 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 CRTAC1Q9NQ79 661 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 ST7Q9NRC1 585 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 METTL5Q9NRN9 209 aaKnown RBP7.13□□□□□ -1.27
VPS13A-201ENST00000355766 FAM114A2Q9NRY5 505 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 FAM49BQ9NUQ9 324 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 COMMD8Q9NX08 183 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 BCCIPQ9P287 314 aaKnown RBP eCLIP7.13□□□□□ -1.27
VPS13A-201ENST00000355766 UTP11Q9Y3A2 253 aaKnown RBP7.13□□□□□ -1.27
VPS13A-201ENST00000355766 KCTD3Q9Y597 815 aa7.13□□□□□ -1.27
VPS13A-201ENST00000355766 HECTD1Q9ULT8 2610 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 PTPRDP23468 1912 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 TCRBV21S2A2A0A5A6 115 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 TMEM110-MUSTN1A8MSY1 372 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 SGK1O00141 431 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 PRPSAP2O60256 369 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 CBFA2T3O75081 653 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 ENDOD1O94919 500 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 KLF8O95600 359 aaPredicted RBP7.12□□□□□ -1.27
VPS13A-201ENST00000355766 NFATC1O95644 943 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 F9P00740 461 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 CALCAP01258 141 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 CCDC130P13994 396 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 PDGFRAP16234 1089 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 HMGA1P17096 107 aaKnown RBP7.12□□□□□ -1.27
VPS13A-201ENST00000355766 BMP7P18075 431 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 LMO2P25791 158 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 HTR7P34969 479 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 MARCKSL1P49006 195 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 VSNL1P62760 191 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 YWHAZP63104 245 aaKnown RBP7.12□□□□□ -1.27
VPS13A-201ENST00000355766 DR1Q01658 176 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 OGDHQ02218 1023 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 ZNF33AQ06730 810 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 CYP4F3Q08477 520 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 TFDP2Q14188 446 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 DPYSL2Q16555 572 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 SLC25A52Q3SY17 297 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 ZNF385BQ569K4 471 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 MDH1BQ5I0G3 518 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 PM20D1Q6GTS8 502 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 SLC36A4Q6YBV0 504 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 PAQR9Q6ZVX9 377 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 BBS12Q6ZW61 710 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 SLCO6A1Q86UG4 719 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 ARHGAP18Q8N392 663 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 ALLCQ8N6M5 410 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 PRELID2Q8N945 189 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 IL17RCQ8NAC3 791 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 TXNDC5Q8NBS9 432 aaKnown RBP7.12□□□□□ -1.27
VPS13A-201ENST00000355766 BBOF1Q8ND07 529 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 SPPL2BQ8TCT7 592 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 AENQ8WTP8 325 aaKnown RBP7.12□□□□□ -1.27
VPS13A-201ENST00000355766 HMGB4Q8WW32 186 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 NTAN1Q96AB6 310 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 PCED1BQ96HM7 432 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 MS4A14Q96JA4 679 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 SLITRK1Q96PX8 696 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 PNKPQ96T60 521 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 PRDM14Q9GZV8 571 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 ZCWPW1Q9H0M4 648 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 POPDC2Q9HBU9 364 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 EHD2Q9NZN4 543 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 KIAA1522Q9P206 1035 aaPredicted RBP7.12□□□□□ -1.27
VPS13A-201ENST00000355766 MYO16Q9Y6X6 1858 aa7.12□□□□□ -1.27
VPS13A-201ENST00000355766 hCG_1818297A0A087WSY0 165 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 FAM92AA1XBS5 289 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 F8VP50 259 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 GOLGA8SH3BPF8 625 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 APOC4-APOC2K7ER74 178 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 HEXIM1O94992 359 aaKnown RBP7.11□□□□□ -1.27
VPS13A-201ENST00000355766 APOC2P02655 101 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 PDGFRBP09619 1106 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 RHOXF2BP0C7M4 288 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 HAPLN1P10915 354 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms