RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 GALNT7Q86SF2 657 aa25.79■■□□□ 1.72
CLK2-201ENST00000355560 SMIM14Q96QK8 99 aa25.79■■□□□ 1.72
CLK2-201ENST00000355560 OMDQ99983 421 aa25.79■■□□□ 1.72
CLK2-201ENST00000355560 C20orf27Q9GZN8 174 aa25.79■■□□□ 1.72
CLK2-201ENST00000355560 ACOT9Q9Y305 439 aa25.79■■□□□ 1.72
CLK2-201ENST00000355560 CLCN5P51795 746 aa25.79■■□□□ 1.72
CLK2-201ENST00000355560 ZNF140P52738 457 aaPredicted RBP25.79■■□□□ 1.72
CLK2-201ENST00000355560 SLC12A2P55011 1212 aa25.79■■□□□ 1.72
CLK2-201ENST00000355560 NTHL1P78549 312 aa25.79■■□□□ 1.72
CLK2-201ENST00000355560 POU4F1Q01851 419 aa25.79■■□□□ 1.72
CLK2-201ENST00000355560 PLEKHG6Q3KR16 790 aa25.79■■□□□ 1.72
CLK2-201ENST00000355560 MDGA1Q8NFP4 955 aa25.79■■□□□ 1.72
CLK2-201ENST00000355560 KCTD4Q8WVF5 259 aa25.79■■□□□ 1.72
CLK2-201ENST00000355560 TDP1Q9NUW8 608 aa25.79■■□□□ 1.72
CLK2-201ENST00000355560 CCDC162PA2VCL2 907 aa25.78■■□□□ 1.72
CLK2-201ENST00000355560 ANKRD66B4E2M5 251 aa25.78■■□□□ 1.72
CLK2-201ENST00000355560 GLP2RO95838 553 aa25.78■■□□□ 1.72
CLK2-201ENST00000355560 SLC4A1P02730 911 aa25.78■■□□□ 1.72
CLK2-201ENST00000355560 HNRNPA1P09651 372 aaKnown RBP eCLIP25.78■■□□□ 1.72
CLK2-201ENST00000355560 CRABP2P29373 138 aa25.78■■□□□ 1.72
CLK2-201ENST00000355560 SCTRP47872 440 aa25.78■■□□□ 1.72
CLK2-201ENST00000355560 CENPLQ8N0S6 344 aaPredicted RBP25.78■■□□□ 1.72
CLK2-201ENST00000355560 THAP1Q9NVV9 213 aa25.78■■□□□ 1.72
CLK2-201ENST00000355560 SLC12A4Q9UP95 1085 aa25.78■■□□□ 1.72
CLK2-201ENST00000355560 SMAD6O43541 496 aaKnown RBP25.78■■□□□ 1.72
CLK2-201ENST00000355560 DLDP09622 509 aaKnown RBP25.78■■□□□ 1.72
CLK2-201ENST00000355560 TAF1AQ15573 450 aaPredicted RBP25.78■■□□□ 1.72
CLK2-201ENST00000355560 C9orf50Q5SZB4 431 aa25.78■■□□□ 1.72
CLK2-201ENST00000355560 LCA5Q86VQ0 697 aa25.78■■□□□ 1.72
CLK2-201ENST00000355560 LEMD2Q8NC56 503 aa25.78■■□□□ 1.72
CLK2-201ENST00000355560 MYOFQ9NZM1 2061 aa25.77■■□□□ 1.72
CLK2-201ENST00000355560 GBF1Q92538 1859 aa25.77■■□□□ 1.72
CLK2-201ENST00000355560 DCTN3O75935 186 aa25.77■■□□□ 1.72
CLK2-201ENST00000355560 PRAMEF12O95522 483 aa25.77■■□□□ 1.72
CLK2-201ENST00000355560 SERPINE1P05121 402 aa25.77■■□□□ 1.72
CLK2-201ENST00000355560 SLC8A1P32418 973 aa25.77■■□□□ 1.72
CLK2-201ENST00000355560 ACTN3Q08043 901 aaPredicted RBP25.77■■□□□ 1.72
CLK2-201ENST00000355560 CCDC15Q0P6D6 951 aa25.77■■□□□ 1.72
CLK2-201ENST00000355560 SETDB1Q15047 1291 aa25.77■■□□□ 1.72
CLK2-201ENST00000355560 RALGPS1Q5JS13 557 aa25.77■■□□□ 1.72
CLK2-201ENST00000355560 GRASPQ7Z6J2 395 aaPredicted RBP25.77■■□□□ 1.72
CLK2-201ENST00000355560 LRRC37BQ96QE4 947 aa25.77■■□□□ 1.72
CLK2-201ENST00000355560 NLE1Q9NVX2 485 aaPredicted RBP25.77■■□□□ 1.72
CLK2-201ENST00000355560 CPSF2Q9P2I0 782 aaKnown RBP25.77■■□□□ 1.72
CLK2-201ENST00000355560 INTS6Q9UL03 887 aaKnown RBP25.77■■□□□ 1.72
CLK2-201ENST00000355560 TK2O00142 265 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 CD3EAPO15446 510 aaKnown RBP25.76■■□□□ 1.71
CLK2-201ENST00000355560 DNAJC6O75061 913 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 S1PR4O95977 384 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 COL6A2P12110 1019 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 GLRBP48167 497 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 AP1S1P61966 158 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 GALNTL6Q49A17 601 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 MRNIPQ6NTE8 343 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 RBM23Q86U06 439 aaKnown RBP25.76■■□□□ 1.71
CLK2-201ENST00000355560 CRLF3Q8IUI8 442 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 ARID3BQ8IVW6 561 aaPredicted RBP25.76■■□□□ 1.71
CLK2-201ENST00000355560 OR4K2Q8NGD2 314 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 OR6K2Q8NGY2 324 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 ERP27Q96DN0 273 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 CDKN2AIPNLQ96HQ2 116 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 OLFM1Q99784 485 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 KCNK13Q9HB14 408 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 ABCB8Q9NUT2 735 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 HCFC2Q9Y5Z7 792 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 C2orf81A6NN90 581 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 G3V2L1 256 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 FSBPO95073 299 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 APOA4P06727 396 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 RALBP11234 206 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 ITGA9Q13797 1035 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 PRSS36Q5K4E3 855 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 EFHBQ8N7U6 833 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 OR4L1Q8NH43 312 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 TMEM120AQ9BXJ8 343 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 CATSPERZQ9NTU4 200 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 MARCOQ9UEW3 520 aaPredicted RBP25.76■■□□□ 1.71
CLK2-201ENST00000355560 RUVBL2Q9Y230 463 aaKnown RBP25.76■■□□□ 1.71
CLK2-201ENST00000355560 PCDHB9Q9Y5E1 797 aa25.76■■□□□ 1.71
CLK2-201ENST00000355560 HLA-FP30511 346 aa25.75■■□□□ 1.71
CLK2-201ENST00000355560 ARFIP2P53365 341 aa25.75■■□□□ 1.71
CLK2-201ENST00000355560 TMEM25Q86YD3 366 aa25.75■■□□□ 1.71
CLK2-201ENST00000355560 GPR150Q8NGU9 434 aa25.75■■□□□ 1.71
CLK2-201ENST00000355560 HTATIP2Q9BUP3 242 aa25.75■■□□□ 1.71
CLK2-201ENST00000355560 MYLK2Q9H1R3 596 aa25.75■■□□□ 1.71
CLK2-201ENST00000355560 MID2Q9UJV3 735 aa25.75■■□□□ 1.71
CLK2-201ENST00000355560 ITM2AO43736 263 aa25.75■■□□□ 1.71
CLK2-201ENST00000355560 LYPLA1O75608 230 aaPredicted RBP25.75■■□□□ 1.71
CLK2-201ENST00000355560 GRK2P25098 689 aa25.75■■□□□ 1.71
CLK2-201ENST00000355560 ABL2P42684 1182 aa25.75■■□□□ 1.71
CLK2-201ENST00000355560 SLC1A6P48664 564 aa25.75■■□□□ 1.71
CLK2-201ENST00000355560 SEMA3AQ14563 771 aa25.75■■□□□ 1.71
CLK2-201ENST00000355560 HECTD2Q5U5R9 776 aa25.75■■□□□ 1.71
CLK2-201ENST00000355560 CCDC91Q7Z6B0 441 aa25.75■■□□□ 1.71
CLK2-201ENST00000355560 C10orf67Q8IYJ2 551 aa25.75■■□□□ 1.71
CLK2-201ENST00000355560 SCYL1Q96KG9 808 aa25.75■■□□□ 1.71
CLK2-201ENST00000355560 ZDHHC7Q9NXF8 308 aa25.75■■□□□ 1.71
CLK2-201ENST00000355560 CRYL1Q9Y2S2 319 aa25.75■■□□□ 1.71
CLK2-201ENST00000355560 A0A087X1B8 175 aa25.74■■□□□ 1.71
CLK2-201ENST00000355560 NEDD8-MDP1E9PL57 170 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms