RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 KIF19Q2TAC6 998 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 AASDHQ4L235 1098 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 LARP4Q71RC2 724 aaKnown RBP eCLIP10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 RAB44Q7Z6P3 723 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 CLYBLQ8N0X4 340 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 IPMKQ8NFU5 416 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 C19orf60Q96EN9 201 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 GPATCH1Q9BRR8 931 aaKnown RBP10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 FSD1LQ9BXM9 530 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 CHST12Q9NRB3 414 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 TREX1Q9NSU2 369 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 SMOXQ9NWM0 555 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 ITGB1BP2Q9UKP3 347 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 A0A0G2JLL6 359 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 SMIM28A0A1B0GU29 152 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 H3BRB1 525 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 CLOCKO15516 846 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 PEX10O60683 326 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 C1QTNF8P60827 252 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 NFKB2Q00653 900 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 PDCD4Q53EL6 469 aaKnown RBP10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 BTBD8Q5XKL5 378 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 PM20D1Q6GTS8 502 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 ESRP1Q6NXG1 681 aaKnown RBP10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 SPRED1Q7Z699 444 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 PRRT2Q7Z6L0 340 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 LRRC49Q8IUZ0 686 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 MIER2Q8N344 545 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 DHRSXQ8N5I4 330 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 ZC3H15Q8WU90 426 aaKnown RBP10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 DPF3Q92784 378 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 NRBF2Q96F24 287 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 NPLQ9BXD5 320 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 TUT1Q9H6E5 874 aaKnown RBP10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 AURKCQ9UQB9 309 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 FGF10O15520 208 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 PORP16435 677 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 ATP6V1B2P21281 511 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 CAPGP40121 348 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 FASTKD5Q7L8L6 764 aaKnown RBP10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 OTOP3Q7RTS5 596 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 ZNF513Q8N8E2 541 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 TRPV3Q8NET8 790 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 GIPC3Q8TF64 312 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 MYRFLQ96LU7 910 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 IL12RB2Q99665 862 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 EIF2AQ9BY44 585 aaKnown RBP10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 TRIM54Q9BYV2 358 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 LIN28AQ9H9Z2 209 aaKnown RBP10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 PDGFCQ9NRA1 345 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 SEPT3Q9UH03 358 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 EBF1Q9UH73 591 aa10.16□□□□□ -0.78
TRAPPC6B-202ENST00000347691 A0A0J9YYE9 177 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 FZD9O00144 591 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 CXCL11O14625 94 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 SPTLC1O15269 473 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 LRIG2O94898 1065 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 MATN4O95460 622 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 NELFEP18615 380 aaKnown RBP10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 GPX3P22352 226 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 STT3AP46977 705 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 LEPRP48357 1165 aaKnown RBP10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 NDUFV1P49821 464 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 CDH15P55291 814 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 C21orf59P57076 290 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 MAP3K7CLP57077 242 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 NAA20P61599 178 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 GRSF1Q12849 480 aaKnown RBP eCLIP10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 MOGQ16653 247 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 XKR4Q5GH76 650 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 DUS1LQ6P1R4 473 aaKnown RBP10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 LAYNQ6UX15 382 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 HFE2Q6ZVN8 426 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 MFSD6LQ8IWD5 586 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 TBC1D21Q8IYX1 336 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 SNRNP27Q8WVK2 155 aaKnown RBP10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 TKTL2Q9H0I9 626 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 CATSPERBQ9H7T0 1116 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 CYP4F12Q9HCS2 524 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 PTCH2Q9Y6C5 1203 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 LTBP3Q9NS15 1303 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 CCDC78A2IDD5 438 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 PLOD2O00469 737 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 MATN3O15232 486 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 BAIAP3O94812 1187 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 FYNP06241 537 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 ADRA1AP35348 466 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 CCT8P50990 548 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 CBX3Q13185 183 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 OSTM1Q86WC4 334 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 OSCP1Q8WVF1 389 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 CYGBQ8WWM9 190 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 C16orf70Q9BSU1 422 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 NXF3Q9H4D5 531 aaKnown RBP10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 GSTO2Q9H4Y5 243 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 RPF2Q9H7B2 306 aaKnown RBP10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 INTS10Q9NVR2 710 aaKnown RBP10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 SMPD3Q9NY59 655 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 GNPTGQ9UJJ9 305 aa10.15□□□□□ -0.78
TRAPPC6B-202ENST00000347691 FADS3Q9Y5Q0 445 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms