RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 CCDC107Q8WV48 283 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 CBWD1Q9BRT8 395 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 OSGEPL1Q9H4B0 414 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 SEC14L4Q9UDX3 406 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 M0QX08 132 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 TKTL1P51854 596 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 EIF2S3LQ2VIR3 472 aaKnown RBP19.44■□□□□ 0.7
HDAC4-201ENST00000345617 P2RY8Q86VZ1 359 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 SLC30A8Q8IWU4 369 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 MBOAT7Q96N66 472 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 ACE2Q9BYF1 805 aaPredicted RBP19.44■□□□□ 0.7
HDAC4-201ENST00000345617 ZNF180Q9UJW8 692 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 CDH7Q9ULB5 785 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 TBC1D24Q9ULP9 559 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 PLOD2O00469 737 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 RARAP10276 462 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 DNAJA4Q8WW22 397 aaPredicted RBP19.44■□□□□ 0.7
HDAC4-201ENST00000345617 FAM136AQ96C01 138 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 ZNF670Q9BS34 389 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 ETNK2Q9NVF9 386 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 KANSL3Q9P2N6 904 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 TSPAN16Q9UKR8 245 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 TTLL13PA6NNM8 815 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 TROAPQ12815 778 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 SPATA19Q7Z5L4 167 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 SLC5A5Q92911 643 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 RCOR3Q9P2K3 495 aaPredicted RBP19.44■□□□□ 0.7
HDAC4-201ENST00000345617 TRPS1Q9UHF7 1281 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 RBM34P42696 430 aaKnown RBP19.44■□□□□ 0.7
HDAC4-201ENST00000345617 TBX4P57082 545 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 ROPN1LQ96C74 230 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 ABCG2Q9UNQ0 655 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 SHROOM3Q8TF72 1996 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 ASMTP46597 345 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 AUHQ13825 339 aaKnown RBP19.44■□□□□ 0.7
HDAC4-201ENST00000345617 TSPAN18Q96SJ8 248 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 FADS3Q9Y5Q0 445 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 ANKDD1BA6NHY2 528 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 PRMT3O60678 531 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 ERBB2P04626 1255 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 VPS26BQ4G0F5 336 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 PIK3R6Q5UE93 754 aa19.44■□□□□ 0.7
HDAC4-201ENST00000345617 PSTKQ8IV42 348 aaKnown RBP19.44■□□□□ 0.7
HDAC4-201ENST00000345617 PCP4L1A6NKN8 68 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 SHOX2O60902 331 aaPredicted RBP19.43■□□□□ 0.7
HDAC4-201ENST00000345617 GPRC5AQ8NFJ5 357 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 ZNF668Q96K58 619 aaPredicted RBP19.43■□□□□ 0.7
HDAC4-201ENST00000345617 CRAMP1Q96RY5 1269 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 MGME1Q9BQP7 344 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 MBL2P11226 248 aaPredicted RBP19.43■□□□□ 0.7
HDAC4-201ENST00000345617 SERPINA4P29622 427 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 MIB1Q86YT6 1006 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 NXF3Q9H4D5 531 aaKnown RBP19.43■□□□□ 0.7
HDAC4-201ENST00000345617 ALG9Q9H6U8 611 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 CFL2Q9Y281 166 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 SIGLEC16A6NMB1 481 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 RPL26P61254 145 aaKnown RBP19.43■□□□□ 0.7
HDAC4-201ENST00000345617 ANO7Q6IWH7 933 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 DNAAF5Q86Y56 855 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 DNAJC28Q9NX36 388 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 MAPK10P53779 464 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 C1orf189Q5VU69 101 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 WDR59Q6PJI9 974 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 POPDC2Q9HBU9 364 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 OGDHLQ9ULD0 1010 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 CATP04040 527 aaKnown RBP19.43■□□□□ 0.7
HDAC4-201ENST00000345617 CLK2P49760 499 aaKnown RBP19.43■□□□□ 0.7
HDAC4-201ENST00000345617 SLC6A3Q01959 620 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 RBBP4Q09028 425 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 HPS6Q86YV9 775 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 KAT2BQ92831 832 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 RAB23Q9ULC3 237 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 TCEA3O75764 348 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 PRKCIP41743 596 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 MTHFRP42898 656 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 SLC25A3Q00325 362 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 ANGEL2Q5VTE6 544 aaKnown RBP19.43■□□□□ 0.7
HDAC4-201ENST00000345617 PCDH12Q9NPG4 1184 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 UXTQ9UBK9 157 aaPredicted RBP19.43■□□□□ 0.7
HDAC4-201ENST00000345617 ZIK1Q3SY52 487 aaPredicted RBP19.43■□□□□ 0.7
HDAC4-201ENST00000345617 DEF8Q6ZN54 512 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 ARL10Q8N8L6 244 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 DNAJB14Q8TBM8 379 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 ZNF606Q8WXB4 792 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 ASB7Q9H672 318 aa19.43■□□□□ 0.7
HDAC4-201ENST00000345617 MRTO4Q9UKD2 239 aaKnown RBP19.43■□□□□ 0.7
HDAC4-201ENST00000345617 RBM47A0AV96 593 aaKnown RBP19.42■□□□□ 0.7
HDAC4-201ENST00000345617 PLIN3O60664 434 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 LIN52Q52LA3 116 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 CHST15Q7LFX5 561 aaPredicted RBP19.42■□□□□ 0.7
HDAC4-201ENST00000345617 DAGLAQ9Y4D2 1042 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 TRIM17Q9Y577 477 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 ACSL4O60488 711 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 IST1P53990 364 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 ANKRD26P1Q6NSI1 321 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 RNF44Q7L0R7 432 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 PCM1Q15154 2024 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 E7ENX8 843 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 CTSKP43235 329 aa19.42■□□□□ 0.7
HDAC4-201ENST00000345617 RPTORQ8N122 1335 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms