RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 GLIS1Q8NBF1 620 aa13.92□□□□□ -0.18
TPM4-202ENST00000344824 C1orf216Q8TAB5 229 aa13.92□□□□□ -0.18
TPM4-202ENST00000344824 HDAC11Q96DB2 347 aa13.92□□□□□ -0.18
TPM4-202ENST00000344824 HDAC8Q9BY41 377 aa13.92□□□□□ -0.18
TPM4-202ENST00000344824 PDFQ9HBH1 243 aa13.92□□□□□ -0.18
TPM4-202ENST00000344824 FZD3Q9NPG1 666 aa13.92□□□□□ -0.18
TPM4-202ENST00000344824 LHX3Q9UBR4 397 aa13.92□□□□□ -0.18
TPM4-202ENST00000344824 IPO11Q9UI26 975 aaKnown RBP13.92□□□□□ -0.18
TPM4-202ENST00000344824 ITM2BQ9Y287 266 aa13.92□□□□□ -0.18
TPM4-202ENST00000344824 PCNX2A6NKB5 2137 aa13.92□□□□□ -0.18
TPM4-202ENST00000344824 C16orf96A6NNT2 1141 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 F5H423 210 aaPredicted RBP13.91□□□□□ -0.18
TPM4-202ENST00000344824 KCNK1O00180 336 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 WNT9AO14904 365 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 INSIG1O15503 277 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 KCNK5O95279 499 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 KRT14P02533 472 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 CD38P28907 300 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 ABL2P42684 1182 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 IL9RQ01113 521 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 PPIDQ08752 370 aaKnown RBP13.91□□□□□ -0.18
TPM4-202ENST00000344824 ZNF235Q14590 738 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 CYTH1Q15438 398 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 ZNF805Q5CZA5 627 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 SEL1L3Q68CR1 1132 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 IL27RAQ6UWB1 636 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 GDPD4Q6W3E5 623 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 MYRIPQ8NFW9 859 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 HTR3CQ8WXA8 447 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 FAM131CQ96AQ9 280 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 SKA1Q96BD8 255 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 ORAI3Q9BRQ5 295 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 OSBPL1AQ9BXW6 950 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 DPH5Q9H2P9 285 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 SLC32A1Q9H598 525 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 USP29Q9HBJ7 922 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 ASIC3Q9UHC3 531 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 GGT7Q9UJ14 662 aa13.91□□□□□ -0.18
TPM4-202ENST00000344824 FNDC3AQ9Y2H6 1198 aaKnown RBP13.91□□□□□ -0.18
TPM4-202ENST00000344824 CFAP69A5D8W1 941 aa13.9□□□□□ -0.18
TPM4-202ENST00000344824 FAM187AA6NFU0 413 aa13.9□□□□□ -0.18
TPM4-202ENST00000344824 GIPC1O14908 333 aa13.9□□□□□ -0.18
TPM4-202ENST00000344824 MAFKO60675 156 aa13.9□□□□□ -0.18
TPM4-202ENST00000344824 WNT1P04628 370 aa13.9□□□□□ -0.18
TPM4-202ENST00000344824 GUCY2DQ02846 1103 aa13.9□□□□□ -0.18
TPM4-202ENST00000344824 TMCO4Q5TGY1 634 aa13.9□□□□□ -0.18
TPM4-202ENST00000344824 HORMAD1Q86X24 394 aa13.9□□□□□ -0.18
TPM4-202ENST00000344824 CCDC110Q8TBZ0 833 aa13.9□□□□□ -0.18
TPM4-202ENST00000344824 NSMCE1Q8WV22 266 aa13.9□□□□□ -0.18
TPM4-202ENST00000344824 FERMT1Q9BQL6 677 aa13.9□□□□□ -0.18
TPM4-202ENST00000344824 BRD8Q9H0E9 1235 aa13.9□□□□□ -0.18
TPM4-202ENST00000344824 TM7SF3Q9NS93 570 aa13.9□□□□□ -0.18
TPM4-202ENST00000344824 DNAAF2Q9NVR5 837 aaKnown RBP13.9□□□□□ -0.18
TPM4-202ENST00000344824 FEZ2Q9UHY8 353 aaPredicted RBP13.9□□□□□ -0.18
TPM4-202ENST00000344824 DMGDHQ9UI17 866 aaKnown RBP13.9□□□□□ -0.18
TPM4-202ENST00000344824 TPX2Q9ULW0 747 aaKnown RBP13.9□□□□□ -0.18
TPM4-202ENST00000344824 ESYT3A0FGR9 886 aa13.9□□□□□ -0.19
TPM4-202ENST00000344824 TM4SF5O14894 197 aa13.9□□□□□ -0.19
TPM4-202ENST00000344824 LATO43561 262 aa13.9□□□□□ -0.19
TPM4-202ENST00000344824 NEBLO76041 1014 aa13.9□□□□□ -0.19
TPM4-202ENST00000344824 STK10O94804 968 aaKnown RBP13.9□□□□□ -0.19
TPM4-202ENST00000344824 CCNCP24863 283 aa13.9□□□□□ -0.19
TPM4-202ENST00000344824 AKT2P31751 481 aa13.9□□□□□ -0.19
TPM4-202ENST00000344824 ACTN2P35609 894 aa13.9□□□□□ -0.19
TPM4-202ENST00000344824 RGRP47804 291 aa13.9□□□□□ -0.19
TPM4-202ENST00000344824 CCT8P50990 548 aa13.9□□□□□ -0.19
TPM4-202ENST00000344824 IL10RBQ08334 325 aa13.9□□□□□ -0.19
TPM4-202ENST00000344824 ZBTB17Q13105 803 aa13.9□□□□□ -0.19
TPM4-202ENST00000344824 PTK6Q13882 451 aa13.9□□□□□ -0.19
TPM4-202ENST00000344824 LBRQ14739 615 aaKnown RBP13.9□□□□□ -0.19
TPM4-202ENST00000344824 STAT4Q14765 748 aa13.9□□□□□ -0.19
TPM4-202ENST00000344824 GLE1Q53GS7 698 aaKnown RBP13.9□□□□□ -0.19
TPM4-202ENST00000344824 PRAMEF14Q5SWL7 426 aa13.9□□□□□ -0.19
TPM4-202ENST00000344824 TIGD7Q6NT04 549 aaPredicted RBP13.9□□□□□ -0.19
TPM4-202ENST00000344824 PLPP6Q8IY26 295 aa13.9□□□□□ -0.19
TPM4-202ENST00000344824 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.9□□□□□ -0.19
TPM4-202ENST00000344824 TSEN2Q8NCE0 465 aaKnown RBP13.9□□□□□ -0.19
TPM4-202ENST00000344824 SETD7Q8WTS6 366 aaKnown RBP13.9□□□□□ -0.19
TPM4-202ENST00000344824 LRIG1Q96JA1 1093 aa13.9□□□□□ -0.19
TPM4-202ENST00000344824 EPB41L5Q9HCM4 733 aa13.9□□□□□ -0.19
TPM4-202ENST00000344824 KLHL8Q9P2G9 620 aaPredicted RBP13.9□□□□□ -0.19
TPM4-202ENST00000344824 ZFR2Q9UPR6 939 aaKnown RBP13.9□□□□□ -0.19
TPM4-202ENST00000344824 DMTF1Q9Y222 760 aa13.9□□□□□ -0.19
TPM4-202ENST00000344824 UTP11Q9Y3A2 253 aaKnown RBP13.9□□□□□ -0.19
TPM4-202ENST00000344824 TTLL3Q9Y4R7 772 aa13.9□□□□□ -0.19
TPM4-202ENST00000344824 FADS3Q9Y5Q0 445 aa13.9□□□□□ -0.19
TPM4-202ENST00000344824 PRAMEF26H0Y7S4 382 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 H0Y8X5 98 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 VILLO15195 856 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 SH3BP5O60239 455 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 JCHAINP01591 159 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 CCNB1P14635 433 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 PTPN3P26045 913 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 STIP1P31948 543 aaKnown RBP13.89□□□□□ -0.19
TPM4-202ENST00000344824 RPL22P35268 128 aaKnown RBP13.89□□□□□ -0.19
TPM4-202ENST00000344824 ADCY8P40145 1251 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 SCNN1BP51168 640 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 GPS1Q13098 491 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 FAXCQ5TGI0 409 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 KIAA1161Q6NSJ0 714 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms