RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 CLCN5P51795 746 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 RABGGTBP53611 331 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 PPM1LQ5SGD2 360 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 ESRP1Q6NXG1 681 aaKnown RBP8.15□□□□□ -1.1
CFAP54-201ENST00000342887 RIMKLAQ8IXN7 391 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 HEXDCQ8WVB3 486 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 SLC10A4Q96EP9 437 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 FEM1CQ96JP0 617 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 KLK14Q9P0G3 267 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 CACNG4Q9UBN1 327 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 SUN2Q9UH99 717 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 UPK1AO00322 258 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 ZMPSTE24O75844 475 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 OGNP20774 298 aaKnown RBP8.15□□□□□ -1.1
CFAP54-201ENST00000342887 GZMMP51124 257 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 AQP4P55087 323 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 TPI1P60174 286 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 NAA20P61599 178 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 IL10RBQ08334 325 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 PPP1R3AQ16821 1122 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 EPHX4Q8IUS5 362 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 TNS4Q8IZW8 715 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 USP33Q8TEY7 942 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 TBC1D20Q96BZ9 403 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 PGBD4Q96DM1 585 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 MYRFLQ96LU7 910 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 TNKS2Q9H2K2 1166 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 MRPL46Q9H2W6 279 aaKnown RBP8.15□□□□□ -1.1
CFAP54-201ENST00000342887 CRISPLD1Q9H336 500 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 SDR39U1Q9NRG7 319 aaPredicted RBP8.15□□□□□ -1.1
CFAP54-201ENST00000342887 PHF24Q9UPV7 400 aa8.15□□□□□ -1.1
CFAP54-201ENST00000342887 KCNK1O00180 336 aa8.15□□□□□ -1.11
CFAP54-201ENST00000342887 SYN3O14994 580 aa8.15□□□□□ -1.11
CFAP54-201ENST00000342887 ANXA9O76027 345 aa8.15□□□□□ -1.11
CFAP54-201ENST00000342887 LINC00271P0C7V0 271 aa8.15□□□□□ -1.11
CFAP54-201ENST00000342887 PCSK1P29120 753 aa8.15□□□□□ -1.11
CFAP54-201ENST00000342887 MAPKAPK2P49137 400 aa8.15□□□□□ -1.11
CFAP54-201ENST00000342887 TAS2R39P59534 338 aa8.15□□□□□ -1.11
CFAP54-201ENST00000342887 MPP1Q00013 466 aa8.15□□□□□ -1.11
CFAP54-201ENST00000342887 CDKL1Q00532 357 aa8.15□□□□□ -1.11
CFAP54-201ENST00000342887 PLOD1Q02809 727 aaPredicted RBP8.15□□□□□ -1.11
CFAP54-201ENST00000342887 KCNC4Q03721 635 aa8.15□□□□□ -1.11
CFAP54-201ENST00000342887 SMU1Q2TAY7 513 aa8.15□□□□□ -1.11
CFAP54-201ENST00000342887 INTS11Q5TA45 600 aaKnown RBP8.15□□□□□ -1.11
CFAP54-201ENST00000342887 LCN8Q6JVE9 175 aa8.15□□□□□ -1.11
CFAP54-201ENST00000342887 HPS6Q86YV9 775 aa8.15□□□□□ -1.11
CFAP54-201ENST00000342887 DENND6AQ8IWF6 608 aa8.15□□□□□ -1.11
CFAP54-201ENST00000342887 CPA6Q8N4T0 437 aa8.15□□□□□ -1.11
CFAP54-201ENST00000342887 PPP1R16BQ96T49 567 aa8.15□□□□□ -1.11
CFAP54-201ENST00000342887 ANKRD60Q9BZ19 345 aa8.15□□□□□ -1.11
CFAP54-201ENST00000342887 GALNT8Q9NY28 637 aa8.15□□□□□ -1.11
CFAP54-201ENST00000342887 MID2Q9UJV3 735 aa8.15□□□□□ -1.11
CFAP54-201ENST00000342887 CDH7Q9ULB5 785 aa8.15□□□□□ -1.11
CFAP54-201ENST00000342887 NAALAD2Q9Y3Q0 740 aa8.15□□□□□ -1.11
CFAP54-201ENST00000342887 GPR45Q9Y5Y3 372 aa8.15□□□□□ -1.11
CFAP54-201ENST00000342887 C7orf72A4D263 438 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 F8W810 466 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 PEX2P28328 305 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 GEMP55040 296 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 AP2B1P63010 937 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 MAPRE1Q15691 268 aaKnown RBP8.14□□□□□ -1.11
CFAP54-201ENST00000342887 LRRC23Q53EV4 343 aaPredicted RBP8.14□□□□□ -1.11
CFAP54-201ENST00000342887 RBM20Q5T481 1227 aaKnown RBP8.14□□□□□ -1.11
CFAP54-201ENST00000342887 RETREG3Q86VR2 466 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 PQLC1Q8N2U9 271 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 PDPRQ8NCN5 879 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 OR52K2Q8NGK3 314 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 SPATA22Q8NHS9 363 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 UBTD2Q8WUN7 234 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 CNDP2Q96KP4 475 aaKnown RBP8.14□□□□□ -1.11
CFAP54-201ENST00000342887 CASD1Q96PB1 797 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 TCF7L2Q9NQB0 619 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 NLE1Q9NVX2 485 aaPredicted RBP8.14□□□□□ -1.11
CFAP54-201ENST00000342887 PPIL1Q9Y3C6 166 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 ARHGAP42A6NI28 874 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 MEI4A8MW99 385 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 MT-CYBP00156 380 aaPredicted RBP8.14□□□□□ -1.11
CFAP54-201ENST00000342887 INHBBP09529 407 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 THRAP10827 490 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 VCLP18206 1134 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 XRCC1P18887 633 aaPredicted RBP8.14□□□□□ -1.11
CFAP54-201ENST00000342887 PRPH2P23942 346 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 ATP5F1P24539 256 aaPredicted RBP8.14□□□□□ -1.11
CFAP54-201ENST00000342887 RGS2P41220 211 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 LIMK1P53667 647 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 EMP3P54852 163 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 COG7P83436 770 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 HSP90AA5PQ58FG0 334 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 SCYL2Q6P3W7 929 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 RSPO2Q6UXX9 243 aaPredicted RBP8.14□□□□□ -1.11
CFAP54-201ENST00000342887 DPP10Q8N608 796 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 NETO2Q8NC67 525 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 SCAMP5Q8TAC9 235 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 ADAMTS19Q8TE59 1207 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 ZNF669Q96BR6 464 aaPredicted RBP8.14□□□□□ -1.11
CFAP54-201ENST00000342887 ROPN1LQ96C74 230 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 NXNL1Q96CM4 212 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 C3orf30Q96M34 536 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 VN1R3Q9BXE9 311 aa8.14□□□□□ -1.11
CFAP54-201ENST00000342887 ACTL8Q9H568 366 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms