RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 ANKRD6Q9Y2G4 727 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 TNPO3Q9Y5L0 923 aaKnown RBP12.87□□□□□ -0.35
LIN54-201ENST00000340417 PAPPA2Q9BXP8 1791 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 OXTRP30559 389 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 SLC8A1P32418 973 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 DUSP3P51452 185 aaPredicted RBP12.87□□□□□ -0.35
LIN54-201ENST00000340417 FBXO43Q4G163 708 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 TRIM68Q6AZZ1 485 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 FAAH2Q6GMR7 532 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 ANKRD33Q7Z3H0 272 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 PNPLA8Q9NP80 782 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 GDE1Q9NZC3 331 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 RABGEF1Q9UJ41 708 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 GPD2P43304 727 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 NAB1Q13506 487 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 POTEHQ6S545 545 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 CCNI2Q6ZMN8 369 aaPredicted RBP12.87□□□□□ -0.35
LIN54-201ENST00000340417 TXNDC5Q8NBS9 432 aaKnown RBP12.87□□□□□ -0.35
LIN54-201ENST00000340417 USP7Q93009 1102 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 LMLNQ96KR4 655 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 ARMC7Q9H6L4 198 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 GID8Q9NWU2 228 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 MRPS33Q9Y291 106 aaKnown RBP12.87□□□□□ -0.35
LIN54-201ENST00000340417 HEBP2Q9Y5Z4 205 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 CAPN7Q9Y6W3 813 aa12.87□□□□□ -0.35
LIN54-201ENST00000340417 HAS3O00219 553 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 DLDP09622 509 aaKnown RBP12.86□□□□□ -0.35
LIN54-201ENST00000340417 ATP6V1E1P36543 226 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 CLCN5P51795 746 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 CHMP1BQ7LBR1 199 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 REXO1L1PQ8IX06 675 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 METTL6Q8TCB7 284 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 LRRC39Q96DD0 335 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 TWNKQ96RR1 684 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 RBBP8Q99708 897 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 PRMT1Q99873 361 aaKnown RBP12.86□□□□□ -0.35
LIN54-201ENST00000340417 IL1RL2Q9HB29 575 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 IGSF9Q9P2J2 1179 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 A0A096LPK6 155 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 FFAR2O15552 330 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 USP1O94782 785 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 LMNAP02545 664 aaKnown RBP12.86□□□□□ -0.35
LIN54-201ENST00000340417 COX7A2P14406 83 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 CPA3P15088 417 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 CXCR3P49682 368 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 PATL1Q86TB9 770 aaKnown RBP12.86□□□□□ -0.35
LIN54-201ENST00000340417 IFNEQ86WN2 208 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 C2orf73Q8N5S3 287 aaPredicted RBP12.86□□□□□ -0.35
LIN54-201ENST00000340417 TACO1Q9BSH4 297 aaKnown RBP12.86□□□□□ -0.35
LIN54-201ENST00000340417 TPSD1Q9BZJ3 242 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 CDC42EP4Q9H3Q1 356 aaKnown RBP12.86□□□□□ -0.35
LIN54-201ENST00000340417 LINC01553A4QN01 128 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 RPP40O75818 363 aaKnown RBP12.86□□□□□ -0.35
LIN54-201ENST00000340417 CLK3P49761 638 aaKnown RBP12.86□□□□□ -0.35
LIN54-201ENST00000340417 CACNG1Q06432 222 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 DHCR24Q15392 516 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 ZCWPW2Q504Y3 356 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 FAM129CQ86XR2 697 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 RASGRP3Q8IV61 690 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 SERPINB12Q96P63 405 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 HGH1Q9BTY7 390 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 NPHS2Q9NP85 383 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 LRCH4O75427 683 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 PRAMEF1O95521 474 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 ATP6V1C1P21283 382 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 SOX11P35716 441 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 ATXN1P54253 815 aaKnown RBP12.86□□□□□ -0.35
LIN54-201ENST00000340417 SEMG2Q02383 582 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 TMEM220Q6QAJ8 160 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 STAG3L4Q8TBR4 150 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 ARMC5Q96C12 935 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 CCDC138Q96M89 665 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 FUCA2Q9BTY2 467 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 SLC25A51Q9H1U9 297 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 SRMSQ9H3Y6 488 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 YY1AP1Q9H869 796 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 MANSC1Q9H8J5 431 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 PIPSLA2A3N6 862 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 NTSP30990 170 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 PLEKHG6Q3KR16 790 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 MS4A13Q5J8X5 152 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 UBXN11Q5T124 520 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 SLC41A1Q8IVJ1 513 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 OR10T2Q8NGX3 314 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 GSDMCQ9BYG8 508 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 HCFC2Q9Y5Z7 792 aa12.86□□□□□ -0.35
LIN54-201ENST00000340417 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.86□□□□□ -0.35
LIN54-201ENST00000340417 ABCB1P08183 1280 aaPredicted RBP12.85□□□□□ -0.35
LIN54-201ENST00000340417 RPL22P35268 128 aaKnown RBP12.85□□□□□ -0.35
LIN54-201ENST00000340417 ZNHIT3Q15649 155 aaPredicted RBP12.85□□□□□ -0.35
LIN54-201ENST00000340417 ATP6AP1LQ52LC2 224 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 PITRM1Q5JRX3 1037 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 DGKKQ5KSL6 1271 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 OR2AP1Q8NGE2 309 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 FBXO25Q8TCJ0 367 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 NDNQ99608 321 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 COQ4Q9Y3A0 265 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 USH1CQ9Y6N9 552 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 C2orf78A6NCI8 922 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 TCP11X1B4DZS4 312 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms