RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 STYXL1Q9Y6J8 313 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 TMEM265A0A087WTH1 108 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 TNPO2O14787 897 aaKnown RBP5.62□□□□□ -1.51
CSDE1-202ENST00000339438 AIM2O14862 343 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 TADA2AO75478 443 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 BCL10O95999 233 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 CES1P23141 567 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 HTR1BP28222 390 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 S100A5P33763 92 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 VAMP7P51809 220 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 GNG2P59768 71 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 RPL7AP62424 266 aaKnown RBP5.62□□□□□ -1.51
CSDE1-202ENST00000339438 RPL10AP62906 217 aaKnown RBP5.62□□□□□ -1.51
CSDE1-202ENST00000339438 ADARB1P78563 741 aaKnown RBP5.62□□□□□ -1.51
CSDE1-202ENST00000339438 GPLD1P80108 840 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 POU5F1BQ06416 359 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 AP3B2Q13367 1082 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 TUBA3CQ13748 450 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 PRPF38BQ5VTL8 546 aaKnown RBP5.62□□□□□ -1.51
CSDE1-202ENST00000339438 LAIR2Q6ISS4 152 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 KRT80Q6KB66 452 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 C16orf89Q6UX73 402 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 TAS2R42Q7RTR8 314 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 LYSMD2Q8IV50 215 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 ZNF786Q8N393 782 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 PACRGLQ8N7B6 248 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 RP9Q8TA86 221 aaKnown RBP5.62□□□□□ -1.51
CSDE1-202ENST00000339438 TOP1MTQ969P6 601 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 NT5C1BQ96P26 610 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 SNX18Q96RF0 628 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 ABI2Q9NYB9 513 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-202ENST00000339438 HACD3Q9P035 362 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 IKBKGQ9Y6K9 419 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-202ENST00000339438 PRORSD1PA6NEY8 169 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 POLR1CO15160 346 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-202ENST00000339438 RFPL2O75678 378 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 VNN2O95498 520 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 PCMT1P22061 227 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 TBXAS1P24557 533 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-202ENST00000339438 ARNTP27540 789 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 GMPRP36959 345 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 YAP1P46937 504 aaKnown RBP5.62□□□□□ -1.51
CSDE1-202ENST00000339438 NME5P56597 212 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 CLDN10P78369 228 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 TRIM25Q14258 630 aaKnown RBP5.62□□□□□ -1.51
CSDE1-202ENST00000339438 FAM187BQ17R55 369 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 CEP55Q53EZ4 464 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 TRMT10BQ6PF06 316 aaKnown RBP5.62□□□□□ -1.51
CSDE1-202ENST00000339438 TTC33Q6PID6 262 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-202ENST00000339438 IDO2Q6ZQW0 420 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 OTOP3Q7RTS5 596 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 FBXO16Q8IX29 292 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-202ENST00000339438 C12orf56Q8IXR9 622 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 PALM2Q8IXS6 379 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 SLC22A15Q8IZD6 547 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 DEPDC4Q8N2C3 294 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 TTC30BQ8N4P2 665 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 IL17RDQ8NFM7 739 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 ADAM32Q8TC27 787 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 STON2Q8WXE9 905 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 SLC7A3Q8WY07 619 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 NTPCRQ9BSD7 190 aaKnown RBP5.62□□□□□ -1.51
CSDE1-202ENST00000339438 MTG1Q9BT17 334 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-202ENST00000339438 RHOBTB2Q9BYZ6 727 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 WDR12Q9GZL7 423 aaKnown RBP5.62□□□□□ -1.51
CSDE1-202ENST00000339438 C11orf49Q9H6J7 331 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 CWH43Q9H720 699 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 WDR41Q9HAD4 459 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 CNGB3Q9NQW8 809 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 AGPAT4Q9NRZ5 378 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 RBAKQ9NYW8 714 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-202ENST00000339438 ATP11BQ9Y2G3 1177 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 ZFC3H1O60293 1989 aaKnown RBP5.62□□□□□ -1.51
CSDE1-202ENST00000339438 CKAP5Q14008 2032 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 LRRK1Q38SD2 2015 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 PIK3R2O00459 728 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 TBX3O15119 743 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 MSCO60682 206 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 INHBAP08476 426 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 GSTM1P09488 218 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 MCF2P10911 925 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 GAP43P17677 238 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 ARL2P36404 184 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 SERPINB5P36952 375 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 EIF2DP41214 584 aaKnown RBP5.62□□□□□ -1.51
CSDE1-202ENST00000339438 HCAR3P49019 387 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 ECT2LQ008S8 904 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 MTMR1Q13613 665 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 PTK2BQ14289 1009 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 ATP6AP1Q15904 470 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 TFDP3Q5H9I0 405 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 FSCBQ5H9T9 825 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 ARMC8Q8IUR7 673 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 ADGRG5Q8IZF4 528 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 NDUFAF2Q8N183 169 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 FBXL6Q8N531 539 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 ASCC1Q8N9N2 400 aaKnown RBP5.62□□□□□ -1.51
CSDE1-202ENST00000339438 FEZF2Q8TBJ5 459 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 GIPC2Q8TF65 315 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms