RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 FASTKD1Q53R41 847 aaKnown RBP17.24■□□□□ 0.35
ATAD3A-201ENST00000339113 NAIF1Q69YI7 327 aaPredicted RBP17.24■□□□□ 0.35
ATAD3A-201ENST00000339113 PTAR1Q7Z6K3 402 aaPredicted RBP17.24■□□□□ 0.35
ATAD3A-201ENST00000339113 CLEC14AQ86T13 490 aa17.24■□□□□ 0.35
ATAD3A-201ENST00000339113 SLC41A1Q8IVJ1 513 aa17.24■□□□□ 0.35
ATAD3A-201ENST00000339113 LMNTD2Q8IXW0 634 aa17.24■□□□□ 0.35
ATAD3A-201ENST00000339113 TDRD5Q8NAT2 981 aaKnown RBP17.24■□□□□ 0.35
ATAD3A-201ENST00000339113 SHKBP1Q8TBC3 707 aa17.24■□□□□ 0.35
ATAD3A-201ENST00000339113 SUDS3Q9H7L9 328 aaPredicted RBP17.24■□□□□ 0.35
ATAD3A-201ENST00000339113 FBXO6Q9NRD1 293 aaPredicted RBP17.24■□□□□ 0.35
ATAD3A-201ENST00000339113 MOSPD3O75425 235 aa17.23■□□□□ 0.35
ATAD3A-201ENST00000339113 PAPSS2O95340 614 aaPredicted RBP17.23■□□□□ 0.35
ATAD3A-201ENST00000339113 NDST3O95803 873 aa17.23■□□□□ 0.35
ATAD3A-201ENST00000339113 FGF1P05230 155 aa17.23■□□□□ 0.35
ATAD3A-201ENST00000339113 TMPRSS15P98073 1019 aa17.23■□□□□ 0.35
ATAD3A-201ENST00000339113 CDH18Q13634 790 aa17.23■□□□□ 0.35
ATAD3A-201ENST00000339113 ZNF460Q14592 562 aa17.23■□□□□ 0.35
ATAD3A-201ENST00000339113 USP10Q14694 798 aaKnown RBP17.23■□□□□ 0.35
ATAD3A-201ENST00000339113 ANO7Q6IWH7 933 aa17.23■□□□□ 0.35
ATAD3A-201ENST00000339113 CNSTQ6PJW8 725 aa17.23■□□□□ 0.35
ATAD3A-201ENST00000339113 LDB1Q86U70 411 aaPredicted RBP17.23■□□□□ 0.35
ATAD3A-201ENST00000339113 CEP97Q8IW35 865 aa17.23■□□□□ 0.35
ATAD3A-201ENST00000339113 TNS4Q8IZW8 715 aa17.23■□□□□ 0.35
ATAD3A-201ENST00000339113 OSBPL1AQ9BXW6 950 aa17.23■□□□□ 0.35
ATAD3A-201ENST00000339113 SCUBE2Q9NQ36 999 aa17.23■□□□□ 0.35
ATAD3A-201ENST00000339113 DNMT3BQ9UBC3 853 aaKnown RBP17.23■□□□□ 0.35
ATAD3A-201ENST00000339113 VPS51Q9UID3 782 aa17.23■□□□□ 0.35
ATAD3A-201ENST00000339113 DCTN4Q9UJW0 460 aa17.23■□□□□ 0.35
ATAD3A-201ENST00000339113 SPO11Q9Y5K1 396 aa17.23■□□□□ 0.35
ATAD3A-201ENST00000339113 K7ERQ8 282 aa17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 BIRC5O15392 142 aa17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 MPOP05164 745 aa17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 LINGO3P0C6S8 592 aa17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 EPCAMP16422 314 aa17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 PCLAFQ15004 111 aa17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 CTC1Q2NKJ3 1217 aa17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 FAM109BQ6ICB4 259 aaPredicted RBP17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 ZNF783Q6ZMS7 281 aa17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 MFN1Q8IWA4 741 aa17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 OR6P1Q8NGX9 317 aa17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 KCNV2Q8TDN2 545 aa17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 TBATAQ96M53 351 aa17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 MAN1C1Q9NR34 630 aa17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 SPATS2LQ9NUQ6 558 aaKnown RBP17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 MARCH4Q9P2E8 410 aaPredicted RBP17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 FCF1Q9Y324 198 aaKnown RBP17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 DENND4CQ5VZ89 1909 aa17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 RANBP2P49792 3224 aaKnown RBP17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 PTPRRQ15256 657 aa17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 GPR158Q5T848 1215 aa17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 FYB2Q5VWT5 728 aa17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 OR13C4Q8NGS5 318 aa17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 DNAJC1Q96KC8 554 aaKnown RBP17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 GCNAQ96QF7 691 aa17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 DENND2DQ9H6A0 471 aaPredicted RBP17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 LHX3Q9UBR4 397 aa17.22■□□□□ 0.35
ATAD3A-201ENST00000339113 FAM95CA0A1B0GW59 222 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 TYW5A2RUC4 315 aaKnown RBP17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 DNAJC6O75061 913 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 SLC35E2BP0CK96 405 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 FGF3P11487 239 aaPredicted RBP17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 PTDSS1P48651 473 aaKnown RBP17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 NTHL1P78549 312 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 TEAD2Q15562 447 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 UGP2Q16851 508 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 SLC5A9Q2M3M2 681 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 TSNAXIP1Q2TAA8 658 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 MBLAC2Q68D91 279 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 ATG14Q6ZNE5 492 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 RAPH1Q70E73 1250 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 NLRP9Q7RTR0 991 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 CLNKQ7Z7G1 428 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 C10orf107Q8IVU9 208 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 BRSK1Q8TDC3 778 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 SH3RF2Q8TEC5 729 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 FAM167BQ9BTA0 163 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 C1QTNF1Q9BXJ1 281 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 TDRD1Q9BXT4 1180 aaKnown RBP17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 KCNK13Q9HB14 408 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 ZFP69BQ9UJL9 534 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 RAI2Q9Y5P3 530 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 PDE4DIPQ5VU43 2346 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 PER2O15055 1255 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 CD151P48509 253 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 OCRLQ01968 901 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 TAF1BQ53T94 588 aaPredicted RBP17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 RBM20Q5T481 1227 aaKnown RBP17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 ATXN7L2Q5T6C5 722 aaPredicted RBP17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 ARMC3Q5W041 872 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 EP400NLQ6ZTU2 488 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 CPXM2Q8N436 756 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 RMDN1Q96DB5 314 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 COPG2Q9UBF2 871 aa17.21■□□□□ 0.35
ATAD3A-201ENST00000339113 SLC7A4O43246 635 aa17.2■□□□□ 0.34
ATAD3A-201ENST00000339113 SMAD6O43541 496 aaKnown RBP17.2■□□□□ 0.34
ATAD3A-201ENST00000339113 SNNO75324 88 aaPredicted RBP17.2■□□□□ 0.34
ATAD3A-201ENST00000339113 CBX6O95503 412 aa17.2■□□□□ 0.34
ATAD3A-201ENST00000339113 TROVE2P10155 538 aaKnown RBP eCLIP17.2■□□□□ 0.34
ATAD3A-201ENST00000339113 HADHAP40939 763 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms