RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 TSPAN11A1L157 253 aa15.74■□□□□ 0.11
LINC01116-202ENST00000339037 ANKRD62A6NC57 917 aa15.74■□□□□ 0.11
LINC01116-202ENST00000339037 FGF10O15520 208 aaPredicted RBP15.74■□□□□ 0.11
LINC01116-202ENST00000339037 SLC28A2O43868 658 aa15.74■□□□□ 0.11
LINC01116-202ENST00000339037 PCCBP05166 539 aa15.74■□□□□ 0.11
LINC01116-202ENST00000339037 JMJD7P0C870 316 aa15.74■□□□□ 0.11
LINC01116-202ENST00000339037 HGFP14210 728 aa15.74■□□□□ 0.11
LINC01116-202ENST00000339037 CCKBRP32239 447 aa15.74■□□□□ 0.11
LINC01116-202ENST00000339037 MMP12P39900 470 aa15.74■□□□□ 0.11
LINC01116-202ENST00000339037 BRAT1Q6PJG6 821 aa15.74■□□□□ 0.11
LINC01116-202ENST00000339037 WDR59Q6PJI9 974 aa15.74■□□□□ 0.11
LINC01116-202ENST00000339037 UMODL1-AS1Q8N2C9 162 aa15.74■□□□□ 0.11
LINC01116-202ENST00000339037 PDXPQ96GD0 296 aa15.74■□□□□ 0.11
LINC01116-202ENST00000339037 WDR92Q96MX6 357 aa15.74■□□□□ 0.11
LINC01116-202ENST00000339037 ZNF641Q96N77 438 aaPredicted RBP15.74■□□□□ 0.11
LINC01116-202ENST00000339037 TMEM74Q96NL1 305 aa15.74■□□□□ 0.11
LINC01116-202ENST00000339037 RBM15Q96T37 977 aaKnown RBP eCLIP15.74■□□□□ 0.11
LINC01116-202ENST00000339037 PCDHB18PQ96TA0 734 aa15.74■□□□□ 0.11
LINC01116-202ENST00000339037 SUV39H2Q9H5I1 410 aa15.74■□□□□ 0.11
LINC01116-202ENST00000339037 ACSL6Q9UKU0 697 aa15.74■□□□□ 0.11
LINC01116-202ENST00000339037 FLNCQ14315 2725 aa15.74■□□□□ 0.11
LINC01116-202ENST00000339037 PTPN13Q12923 2485 aa15.73■□□□□ 0.11
LINC01116-202ENST00000339037 WASH4PA8MWX3 477 aa15.73■□□□□ 0.11
LINC01116-202ENST00000339037 CCP110O43303 1012 aa15.73■□□□□ 0.11
LINC01116-202ENST00000339037 TNFP01375 233 aa15.73■□□□□ 0.11
LINC01116-202ENST00000339037 STAT1P42224 750 aa15.73■□□□□ 0.11
LINC01116-202ENST00000339037 ZNF143P52747 638 aaPredicted RBP15.73■□□□□ 0.11
LINC01116-202ENST00000339037 MTM1Q13496 603 aa15.73■□□□□ 0.11
LINC01116-202ENST00000339037 AGERQ15109 404 aa15.73■□□□□ 0.11
LINC01116-202ENST00000339037 CYTH1Q15438 398 aa15.73■□□□□ 0.11
LINC01116-202ENST00000339037 CLEC16AQ2KHT3 1053 aa15.73■□□□□ 0.11
LINC01116-202ENST00000339037 FKBP15Q5T1M5 1219 aa15.73■□□□□ 0.11
LINC01116-202ENST00000339037 DNAJC24Q6P3W2 148 aa15.73■□□□□ 0.11
LINC01116-202ENST00000339037 NYAP1Q6ZVC0 841 aa15.73■□□□□ 0.11
LINC01116-202ENST00000339037 PHF13Q86YI8 300 aaPredicted RBP15.73■□□□□ 0.11
LINC01116-202ENST00000339037 CCNJLQ8IV13 435 aa15.73■□□□□ 0.11
LINC01116-202ENST00000339037 GBP4Q96PP9 640 aa15.73■□□□□ 0.11
LINC01116-202ENST00000339037 LRRN3Q9H3W5 708 aa15.73■□□□□ 0.11
LINC01116-202ENST00000339037 CLMPQ9H6B4 373 aa15.73■□□□□ 0.11
LINC01116-202ENST00000339037 DONSONQ9NYP3 566 aa15.73■□□□□ 0.11
LINC01116-202ENST00000339037 PISDQ9UG56 409 aa15.73■□□□□ 0.11
LINC01116-202ENST00000339037 FZD10Q9ULW2 581 aa15.73■□□□□ 0.11
LINC01116-202ENST00000339037 SIK3Q9Y2K2 1263 aa15.73■□□□□ 0.11
LINC01116-202ENST00000339037 ATP8A1Q9Y2Q0 1164 aa15.73■□□□□ 0.11
LINC01116-202ENST00000339037 DGKBQ9Y6T7 804 aa15.73■□□□□ 0.11
LINC01116-202ENST00000339037 LRRK1Q38SD2 2015 aa15.73■□□□□ 0.11
LINC01116-202ENST00000339037 SIGLEC16A6NMB1 481 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 PYCARD-AS1I3L0S3 204 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 CACNB4O00305 520 aaPredicted RBP15.72■□□□□ 0.11
LINC01116-202ENST00000339037 NVLO15381 856 aaKnown RBP15.72■□□□□ 0.11
LINC01116-202ENST00000339037 EFSO43281 561 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 PRKCGP05129 697 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 TPM2P07951 284 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 KRT10P13645 584 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 GLB1P16278 677 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 COPB1P53618 953 aaKnown RBP15.72■□□□□ 0.11
LINC01116-202ENST00000339037 AIF1P55008 147 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 SYCP1Q15431 976 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 TGIF1Q15583 401 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 CERCAMQ5T4B2 595 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 KCTD16Q68DU8 428 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 USP53Q70EK8 1073 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 MON1BQ7L1V2 547 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 PRICKLE2Q7Z3G6 844 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 ZSWIM9Q86XI8 627 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 CAMK1DQ8IU85 385 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 Q8N9G6 341 aaPredicted RBP15.72■□□□□ 0.11
LINC01116-202ENST00000339037 GPR156Q8NFN8 814 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 SGF29Q96ES7 293 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 MCEEQ96PE7 176 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 TUBGCP5Q96RT8 1024 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 CNPY3Q9BT09 278 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 LRRC19Q9H756 370 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 ATP13A3Q9H7F0 1226 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 PDFQ9HBH1 243 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 SEPT11Q9NVA2 429 aaKnown RBP15.72■□□□□ 0.11
LINC01116-202ENST00000339037 APPL1Q9UKG1 709 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 LOXL2Q9Y4K0 774 aa15.72■□□□□ 0.11
LINC01116-202ENST00000339037 UNC13CQ8NB66 2214 aa15.71■□□□□ 0.11
LINC01116-202ENST00000339037 J3KR12 359 aa15.71■□□□□ 0.11
LINC01116-202ENST00000339037 NOBOXO60393 691 aa15.71■□□□□ 0.11
LINC01116-202ENST00000339037 BUB1BO60566 1050 aaPredicted RBP15.71■□□□□ 0.11
LINC01116-202ENST00000339037 PRAMEF11O60813 436 aa15.71■□□□□ 0.11
LINC01116-202ENST00000339037 LIPCP11150 499 aa15.71■□□□□ 0.11
LINC01116-202ENST00000339037 SERPINA4P29622 427 aa15.71■□□□□ 0.11
LINC01116-202ENST00000339037 HTR7P34969 479 aa15.71■□□□□ 0.11
LINC01116-202ENST00000339037 KIAA1024LP59773 190 aa15.71■□□□□ 0.11
LINC01116-202ENST00000339037 TPI1P60174 286 aa15.71■□□□□ 0.11
LINC01116-202ENST00000339037 RPL7AP62424 266 aaKnown RBP15.71■□□□□ 0.11
LINC01116-202ENST00000339037 KCNC4Q03721 635 aa15.71■□□□□ 0.11
LINC01116-202ENST00000339037 SASS6Q6UVJ0 657 aa15.71■□□□□ 0.11
LINC01116-202ENST00000339037 TAF8Q7Z7C8 310 aa15.71■□□□□ 0.11
LINC01116-202ENST00000339037 PLA2G15Q8NCC3 412 aa15.71■□□□□ 0.11
LINC01116-202ENST00000339037 FAM46DQ8NEK8 389 aa15.71■□□□□ 0.11
LINC01116-202ENST00000339037 OR56A4Q8NGH8 313 aa15.71■□□□□ 0.11
LINC01116-202ENST00000339037 OR1E3Q8WZA6 343 aa15.71■□□□□ 0.11
LINC01116-202ENST00000339037 TMEM159Q96B96 161 aa15.71■□□□□ 0.11
LINC01116-202ENST00000339037 FGF22Q9HCT0 170 aa15.71■□□□□ 0.11
LINC01116-202ENST00000339037 TMEM202A6NGA9 273 aa15.7■□□□□ 0.1
LINC01116-202ENST00000339037 RECQL5O94762 991 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms