RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 EPHB2P29323 1055 aa11.56□□□□□ -0.56
CSMD2-202ENST00000338325 YBEYP58557 167 aaPredicted RBP11.56□□□□□ -0.56
CSMD2-202ENST00000338325 CYP4F2P78329 520 aa11.56□□□□□ -0.56
CSMD2-202ENST00000338325 SERINC3Q13530 473 aa11.56□□□□□ -0.56
CSMD2-202ENST00000338325 ARHGEF7Q14155 803 aa11.56□□□□□ -0.56
CSMD2-202ENST00000338325 HLTFQ14527 1009 aaKnown RBP eCLIP11.56□□□□□ -0.56
CSMD2-202ENST00000338325 CYTH1Q15438 398 aa11.56□□□□□ -0.56
CSMD2-202ENST00000338325 PARP15Q460N3 678 aa11.56□□□□□ -0.56
CSMD2-202ENST00000338325 MAP9Q49MG5 647 aa11.56□□□□□ -0.56
CSMD2-202ENST00000338325 CFAP58Q5T655 872 aa11.56□□□□□ -0.56
CSMD2-202ENST00000338325 TMEM164Q5U3C3 297 aa11.56□□□□□ -0.56
CSMD2-202ENST00000338325 SPECC1LQ69YQ0 1117 aa11.56□□□□□ -0.56
CSMD2-202ENST00000338325 BRAT1Q6PJG6 821 aa11.56□□□□□ -0.56
CSMD2-202ENST00000338325 TMPRSS9Q7Z410 1059 aa11.56□□□□□ -0.56
CSMD2-202ENST00000338325 PHLDB2Q86SQ0 1253 aa11.56□□□□□ -0.56
CSMD2-202ENST00000338325 PLA2G15Q8NCC3 412 aa11.56□□□□□ -0.56
CSMD2-202ENST00000338325 OR56A4Q8NGH8 313 aa11.56□□□□□ -0.56
CSMD2-202ENST00000338325 CENPIQ92674 756 aaPredicted RBP11.56□□□□□ -0.56
CSMD2-202ENST00000338325 FUBP1Q96AE4 644 aaKnown RBP11.56□□□□□ -0.56
CSMD2-202ENST00000338325 TUBGCP2Q9BSJ2 902 aa11.56□□□□□ -0.56
CSMD2-202ENST00000338325 SLC25A18Q9H1K4 315 aa11.56□□□□□ -0.56
CSMD2-202ENST00000338325 FGF22Q9HCT0 170 aa11.56□□□□□ -0.56
CSMD2-202ENST00000338325 GEMIN8Q9NWZ8 242 aaKnown RBP11.56□□□□□ -0.56
CSMD2-202ENST00000338325 AKAP7Q9P0M2 348 aaPredicted RBP11.56□□□□□ -0.56
CSMD2-202ENST00000338325 NOCTQ9UK39 431 aaKnown RBP11.56□□□□□ -0.56
CSMD2-202ENST00000338325 ATP8A1Q9Y2Q0 1164 aa11.56□□□□□ -0.56
CSMD2-202ENST00000338325 TMEM202A6NGA9 273 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 CYP1A1P04798 512 aaPredicted RBP11.55□□□□□ -0.56
CSMD2-202ENST00000338325 KELP23276 732 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 CLCA4Q14CN2 919 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 C16orf72Q14CZ0 275 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 SLFN11Q7Z7L1 901 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 SFTPA2Q8IWL1 248 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 PYROXD2Q8N2H3 581 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 MLKLQ8NB16 471 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 SLC20A1Q8WUM9 679 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 ZNF641Q96N77 438 aaPredicted RBP11.55□□□□□ -0.56
CSMD2-202ENST00000338325 C11orf70Q9BRQ4 267 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 STK33Q9BYT3 514 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 TMEM168Q9H0V1 697 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 ADNPQ9H2P0 1102 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 SEMA6CQ9H3T2 930 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 DPEP2Q9H4A9 486 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 MRPL40Q9NQ50 206 aaKnown RBP11.55□□□□□ -0.56
CSMD2-202ENST00000338325 UBA2Q9UBT2 640 aaPredicted RBP11.55□□□□□ -0.56
CSMD2-202ENST00000338325 COL12A1Q99715 3063 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 CFAP69A5D8W1 941 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 WASH4PA8MWX3 477 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 STMND1H3BQB6 276 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 PES1O00541 588 aaKnown RBP11.55□□□□□ -0.56
CSMD2-202ENST00000338325 TNFRSF10CO14798 259 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 CPNE6O95741 557 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 PRKCGP05129 697 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 HOXC4P09017 264 aaPredicted RBP11.55□□□□□ -0.56
CSMD2-202ENST00000338325 ATP1A2P50993 1020 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 B4GALNT1Q00973 533 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 FMO1Q01740 532 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 CDR2Q01850 454 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 TLE1Q04724 770 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 RALGDSQ12967 914 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 CAMK4Q16566 473 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 EFHC2Q5JST6 749 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 PIM3Q86V86 326 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 ZSWIM9Q86XI8 627 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 UMODL1-AS1Q8N2C9 162 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 SLC30A5Q8TAD4 765 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 KIAA1524Q8TCG1 905 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 TUBGCP5Q96RT8 1024 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 CATSPERBQ9H7T0 1116 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 DOPEY2Q9Y3R5 2298 aa11.55□□□□□ -0.56
CSMD2-202ENST00000338325 ZFC3H1O60293 1989 aaKnown RBP11.55□□□□□ -0.56
CSMD2-202ENST00000338325 HGSO14964 777 aaPredicted RBP11.54□□□□□ -0.56
CSMD2-202ENST00000338325 CREB3O43889 395 aa11.54□□□□□ -0.56
CSMD2-202ENST00000338325 BUB1BO60566 1050 aaPredicted RBP11.54□□□□□ -0.56
CSMD2-202ENST00000338325 RECQL5O94762 991 aaPredicted RBP11.54□□□□□ -0.56
CSMD2-202ENST00000338325 GFPT2O94808 682 aa11.54□□□□□ -0.56
CSMD2-202ENST00000338325 ELFN1P0C7U0 828 aa11.54□□□□□ -0.56
CSMD2-202ENST00000338325 KRT3P12035 628 aa11.54□□□□□ -0.56
CSMD2-202ENST00000338325 GPD1P21695 349 aa11.54□□□□□ -0.56
CSMD2-202ENST00000338325 RFC1P35251 1148 aaPredicted RBP11.54□□□□□ -0.56
CSMD2-202ENST00000338325 GSCP56915 257 aaPredicted RBP11.54□□□□□ -0.56
CSMD2-202ENST00000338325 CLPPQ16740 277 aaPredicted RBP11.54□□□□□ -0.56
CSMD2-202ENST00000338325 TSR1Q2NL82 804 aaKnown RBP11.54□□□□□ -0.56
CSMD2-202ENST00000338325 HSP90AA4PQ58FG1 418 aa11.54□□□□□ -0.56
CSMD2-202ENST00000338325 TRIM72Q6ZMU5 477 aa11.54□□□□□ -0.56
CSMD2-202ENST00000338325 ZNF438Q7Z4V0 828 aa11.54□□□□□ -0.56
CSMD2-202ENST00000338325 CAMK1DQ8IU85 385 aa11.54□□□□□ -0.56
CSMD2-202ENST00000338325 CCL4L1Q8NHW4 92 aa11.54□□□□□ -0.56
CSMD2-202ENST00000338325 JPH3Q8WXH2 748 aaPredicted RBP11.54□□□□□ -0.56
CSMD2-202ENST00000338325 SELENOOQ9BVL4 669 aa11.54□□□□□ -0.56
CSMD2-202ENST00000338325 SLC12A9Q9BXP2 914 aa11.54□□□□□ -0.56
CSMD2-202ENST00000338325 WDR26Q9H7D7 661 aa11.54□□□□□ -0.56
CSMD2-202ENST00000338325 ATP13A3Q9H7F0 1226 aa11.54□□□□□ -0.56
CSMD2-202ENST00000338325 PDFQ9HBH1 243 aa11.54□□□□□ -0.56
CSMD2-202ENST00000338325 RDH14Q9HBH5 336 aa11.54□□□□□ -0.56
CSMD2-202ENST00000338325 CYP4F12Q9HCS2 524 aa11.54□□□□□ -0.56
CSMD2-202ENST00000338325 SEPT3Q9UH03 358 aa11.54□□□□□ -0.56
CSMD2-202ENST00000338325 MOSPD1Q9UJG1 213 aa11.54□□□□□ -0.56
CSMD2-202ENST00000338325 PRSS38A1L453 326 aa11.53□□□□□ -0.56
CSMD2-202ENST00000338325 FGF10O15520 208 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms