RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 BNIP1Q12981 228 aa12.5□□□□□ -0.41
ZNF548-201ENST00000336128 TAF1AQ15573 450 aaPredicted RBP12.5□□□□□ -0.41
ZNF548-201ENST00000336128 RETSATQ6NUM9 610 aa12.5□□□□□ -0.41
ZNF548-201ENST00000336128 GLT6D1Q7Z4J2 308 aa12.5□□□□□ -0.41
ZNF548-201ENST00000336128 CCDC91Q7Z6B0 441 aa12.5□□□□□ -0.41
ZNF548-201ENST00000336128 LCA5Q86VQ0 697 aa12.5□□□□□ -0.41
ZNF548-201ENST00000336128 CRLF3Q8IUI8 442 aa12.5□□□□□ -0.41
ZNF548-201ENST00000336128 CMTM8Q8IZV2 173 aa12.5□□□□□ -0.41
ZNF548-201ENST00000336128 PNPLA1Q8N8W4 532 aa12.5□□□□□ -0.41
ZNF548-201ENST00000336128 FIBINQ8TAL6 211 aa12.5□□□□□ -0.41
ZNF548-201ENST00000336128 RIN3Q8TB24 985 aa12.5□□□□□ -0.41
ZNF548-201ENST00000336128 ERP27Q96DN0 273 aa12.5□□□□□ -0.41
ZNF548-201ENST00000336128 SCYL1Q96KG9 808 aa12.5□□□□□ -0.41
ZNF548-201ENST00000336128 KIAA1522Q9P206 1035 aaPredicted RBP12.5□□□□□ -0.41
ZNF548-201ENST00000336128 ITM2AO43736 263 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 LYPLA1O75608 230 aaPredicted RBP12.49□□□□□ -0.41
ZNF548-201ENST00000336128 DNAJC8O75937 253 aaPredicted RBP12.49□□□□□ -0.41
ZNF548-201ENST00000336128 GLP2RO95838 553 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 S1PR4O95977 384 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 CYBBP04839 570 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 RALBP11234 206 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 GRK2P25098 689 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 HOXA9P31269 272 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 SLC1A6P48664 564 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 NTHL1P78549 312 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 SLC5A9Q2M3M2 681 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 LRRC8EQ6NSJ5 796 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 ARID3BQ8IVW6 561 aaPredicted RBP12.49□□□□□ -0.41
ZNF548-201ENST00000336128 CENPLQ8N0S6 344 aaPredicted RBP12.49□□□□□ -0.41
ZNF548-201ENST00000336128 MDGA1Q8NFP4 955 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 GPR150Q8NGU9 434 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 OLFM1Q99784 485 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 LBHD1Q9BQE6 289 aaPredicted RBP12.49□□□□□ -0.41
ZNF548-201ENST00000336128 ADGRE3Q9BY15 652 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 NLE1Q9NVX2 485 aaPredicted RBP12.49□□□□□ -0.41
ZNF548-201ENST00000336128 RUVBL2Q9Y230 463 aaKnown RBP12.49□□□□□ -0.41
ZNF548-201ENST00000336128 CD3EAPO15446 510 aaKnown RBP12.49□□□□□ -0.41
ZNF548-201ENST00000336128 SLC4A1P02730 911 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 RB1P06400 928 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 HNRNPA1P09651 372 aaKnown RBP eCLIP12.49□□□□□ -0.41
ZNF548-201ENST00000336128 MYL2P10916 166 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 AP1S1P61966 158 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 DLG1Q12959 904 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 ITGA9Q13797 1035 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 SEMA3AQ14563 771 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 RALGPS1Q5JS13 557 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 HECTD2Q5U5R9 776 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 MRNIPQ6NTE8 343 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 ZYG11AQ6WRX3 759 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 MICALL1Q8N3F8 863 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 EFHBQ8N7U6 833 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 RDH11Q8TC12 318 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 PDCD6IPQ8WUM4 868 aaKnown RBP12.49□□□□□ -0.41
ZNF548-201ENST00000336128 USP13Q92995 863 aaPredicted RBP12.49□□□□□ -0.41
ZNF548-201ENST00000336128 ACDQ96AP0 544 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 TSPAN17Q96FV3 270 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 CDKN2AIPNLQ96HQ2 116 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 LRRC37BQ96QE4 947 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 TM6SF2Q9BZW4 377 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 ECT2Q9H8V3 914 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 CATSPERZQ9NTU4 200 aa12.49□□□□□ -0.41
ZNF548-201ENST00000336128 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.49□□□□□ -0.41
ZNF548-201ENST00000336128 GRXCR1A8MXD5 290 aa12.48□□□□□ -0.41
ZNF548-201ENST00000336128 TK2O00142 265 aa12.48□□□□□ -0.41
ZNF548-201ENST00000336128 SMAD6O43541 496 aaKnown RBP12.48□□□□□ -0.41
ZNF548-201ENST00000336128 XYLBO75191 536 aa12.48□□□□□ -0.41
ZNF548-201ENST00000336128 KLHL2O95198 593 aa12.48□□□□□ -0.41
ZNF548-201ENST00000336128 OGNP20774 298 aaKnown RBP12.48□□□□□ -0.41
ZNF548-201ENST00000336128 PSMA3P25788 255 aa12.48□□□□□ -0.41
ZNF548-201ENST00000336128 SLC8A1P32418 973 aa12.48□□□□□ -0.41
ZNF548-201ENST00000336128 ABL2P42684 1182 aa12.48□□□□□ -0.41
ZNF548-201ENST00000336128 GLRBP48167 497 aa12.48□□□□□ -0.41
ZNF548-201ENST00000336128 NCALDP61601 193 aa12.48□□□□□ -0.41
ZNF548-201ENST00000336128 TSNAXIP1Q2TAA8 658 aa12.48□□□□□ -0.41
ZNF548-201ENST00000336128 PLEKHG6Q3KR16 790 aa12.48□□□□□ -0.41
ZNF548-201ENST00000336128 PRSS36Q5K4E3 855 aa12.48□□□□□ -0.41
ZNF548-201ENST00000336128 LEMD2Q8NC56 503 aa12.48□□□□□ -0.41
ZNF548-201ENST00000336128 OR4K2Q8NGD2 314 aa12.48□□□□□ -0.41
ZNF548-201ENST00000336128 OR6Y1Q8NGX8 325 aa12.48□□□□□ -0.41
ZNF548-201ENST00000336128 OR4L1Q8NH43 312 aa12.48□□□□□ -0.41
ZNF548-201ENST00000336128 NXNL1Q96CM4 212 aa12.48□□□□□ -0.41
ZNF548-201ENST00000336128 LMLNQ96KR4 655 aa12.48□□□□□ -0.41
ZNF548-201ENST00000336128 GPR78Q96P69 363 aa12.48□□□□□ -0.41
ZNF548-201ENST00000336128 KCNK4Q9NYG8 393 aa12.48□□□□□ -0.41
ZNF548-201ENST00000336128 CPSF2Q9P2I0 782 aaKnown RBP12.48□□□□□ -0.41
ZNF548-201ENST00000336128 MARCOQ9UEW3 520 aaPredicted RBP12.48□□□□□ -0.41
ZNF548-201ENST00000336128 INTS6Q9UL03 887 aaKnown RBP12.48□□□□□ -0.41
ZNF548-201ENST00000336128 C2orf81A6NN90 581 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.47□□□□□ -0.41
ZNF548-201ENST00000336128 ANKRD66B4E2M5 251 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 FZD6O60353 706 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 DNAJC6O75061 913 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 PRAMEF12O95522 483 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 SBK3P0C264 359 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 KITP10721 976 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 PLK1P53350 603 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 ABCE1P61221 599 aaKnown RBP12.47□□□□□ -0.41
ZNF548-201ENST00000336128 PITRM1Q5JRX3 1037 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 ZNF697Q5TEC3 545 aa12.47□□□□□ -0.41
ZNF548-201ENST00000336128 AFTPHQ6ULP2 937 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms