RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 FBXO31Q5XUX0 539 aaPredicted RBP10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 HLA-DQA1Q5Y7H0 255 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 MAP3K14Q99558 947 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 ANKRA2Q9H9E1 313 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 OR6C70A6NIJ9 312 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 VAPBO95292 243 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 PSKH1P11801 424 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 NPY2RP49146 381 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 MAN2A2P49641 1150 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 NUMBP49757 651 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 FAM76BQ5HYJ3 339 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 FAM160B2Q86V87 743 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 OR2L3Q8NG85 312 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 ZNF570Q96NI8 536 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 EIF2AK1Q9BQI3 630 aaKnown RBP10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 SLC4A5Q9BY07 1137 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 C1orf21Q9H246 121 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 FAM105AQ9NUU6 356 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 DNAJC28Q9NX36 388 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 FAM53CQ9NYF3 392 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 PDE10AQ9Y233 779 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 TLL2Q9Y6L7 1015 aa10.38□□□□□ -0.75
SPTBN1-201ENST00000333896 KANTRA0A1W2PQU2 76 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 BHMG1C9JSJ3 638 aaPredicted RBP10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 TP73O15350 636 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 PTTG1O95997 202 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 TDGQ13569 410 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 ALG11Q2TAA5 492 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 TIGD4Q8IY51 512 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 OR8K3Q8NH51 312 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 LEF1Q9UJU2 399 aaPredicted RBP10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 SNX6Q9UNH7 406 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 RNASEH1O60930 286 aaKnown RBP10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 ZNF234Q14588 700 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 DLG2Q15700 870 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 PGAP1Q75T13 922 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 OR52K2Q8NGK3 314 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 ART4Q93070 314 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 ACSF2Q96CM8 615 aaPredicted RBP10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 LGR6Q9HBX8 967 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 AHSPQ9NZD4 102 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 ZMYM5Q9UJ78 669 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 AP5Z1O43299 807 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 PGAM1P18669 254 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 FXR2P51116 673 aaKnown RBP eCLIP10.37□□□□□ -0.754e-13■■■■□ 25.9
SPTBN1-201ENST00000333896 ARHGAP36Q6ZRI8 547 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 CCDC107Q8WV48 283 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 ZNF354BQ96LW1 612 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 CKLFQ9UBR5 152 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 MID1O15344 667 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 CD2P06729 351 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 FGFR1P11362 822 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 POF1BQ8WVV4 589 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 FATE1Q969F0 183 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 KAT8Q9H7Z6 458 aaKnown RBP10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 ALG5Q9Y673 324 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 SLC25A12O75746 678 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 MAGEA6P43360 314 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 RGS19P49795 217 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 CARTPTQ16568 116 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 GPALPP1Q8IXQ4 340 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 DCAF4Q8WV16 495 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 JPH3Q8WXH2 748 aaPredicted RBP10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 EIF3KQ9UBQ5 218 aaKnown RBP10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 MFHAS1Q9Y4C4 1052 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 ZNF608Q9ULD9 1512 aaPredicted RBP10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 MAPK9P45984 424 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 GPR15P49685 360 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 CYP4F8P98187 520 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 MPP1Q00013 466 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 TTLL4Q14679 1199 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 AGMOQ6ZNB7 445 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 CMTR2Q8IYT2 770 aaKnown RBP10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 ROPN1LQ96C74 230 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 SPACA7Q96KW9 195 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 ACTR8Q9H981 624 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 PCDHGB3Q9Y5G1 929 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 NDUFS2O75306 463 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 C7P10643 843 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 ZNF3P17036 446 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 GPD1P21695 349 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 GOLGA7BQ2TAP0 167 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 C10orf120Q5SQS8 335 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 KLHL35Q6PF15 583 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 KLHL5Q96PQ7 755 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 PIN4Q9Y237 131 aaKnown RBP10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 MAN2B2Q9Y2E5 1009 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 HIF3AQ9Y2N7 669 aa10.37□□□□□ -0.75
SPTBN1-201ENST00000333896 SPTLC1O15269 473 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 FDPSP14324 419 aaKnown RBP10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 ANKFN1Q8N957 763 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 C11orf24Q96F05 449 aaPredicted RBP10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 THAP2Q9H0W7 228 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 WDCPQ9H6R7 721 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 AP4E1Q9UPM8 1137 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 SEC22BO75396 215 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 ADRA1DP25100 572 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 QPCTQ16769 361 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 KHDC1Q4VXA5 237 aaKnown RBP10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 ISOC1Q96CN7 298 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms