RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 NXNL1Q96CM4 212 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 RILPQ96NA2 401 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 ARHGEF3Q9NR81 526 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 CATSPERZQ9NTU4 200 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 NLE1Q9NVX2 485 aaPredicted RBP14.03□□□□□ -0.16
TRAIP-201ENST00000331456 VPS51Q9UID3 782 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 HAO1Q9UJM8 370 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 VWA7Q9Y334 891 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 OR51B4Q9Y5P0 310 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 SLC4A7Q9Y6M7 1214 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 CCDC162PA2VCL2 907 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 FCHO1O14526 889 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 AURKAO14965 403 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 TLL1O43897 1013 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 CD160O95971 181 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 PIRTP0C851 137 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 BMPR1AP36894 532 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 LBX1P52954 281 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 ZNF460Q14592 562 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 TMEM240Q5SV17 173 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 FAM91A1Q658Y4 838 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 FAM45BPQ6NSW5 357 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 CYB5D1Q6P9G0 228 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 NCEH1Q6PIU2 408 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 FAM45AQ8TCE6 357 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 SP7Q8TDD2 431 aaPredicted RBP14.03□□□□□ -0.16
TRAIP-201ENST00000331456 USP13Q92995 863 aaPredicted RBP14.03□□□□□ -0.16
TRAIP-201ENST00000331456 SORT1Q99523 831 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 NDNQ99608 321 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 MRPL57Q9BQC6 102 aaKnown RBP14.03□□□□□ -0.16
TRAIP-201ENST00000331456 LRMDAQ9H2I8 198 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 MRPL46Q9H2W6 279 aaKnown RBP14.03□□□□□ -0.16
TRAIP-201ENST00000331456 KLC4Q9NSK0 619 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 CXXC1Q9P0U4 656 aaPredicted RBP14.03□□□□□ -0.16
TRAIP-201ENST00000331456 PCDH10Q9P2E7 1040 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 LHX3Q9UBR4 397 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 PCDHGC4Q9Y5F7 938 aa14.03□□□□□ -0.16
TRAIP-201ENST00000331456 C2orf71A6NGG8 1288 aa14.02□□□□□ -0.16
TRAIP-201ENST00000331456 OR51F1A6NGY5 319 aa14.02□□□□□ -0.16
TRAIP-201ENST00000331456 TK2O00142 265 aa14.02□□□□□ -0.16
TRAIP-201ENST00000331456 CCL16O15467 120 aa14.02□□□□□ -0.16
TRAIP-201ENST00000331456 BUD23O43709 281 aaKnown RBP14.02□□□□□ -0.16
TRAIP-201ENST00000331456 CYBBP04839 570 aa14.02□□□□□ -0.16
TRAIP-201ENST00000331456 ZNF140P52738 457 aaPredicted RBP14.02□□□□□ -0.16
TRAIP-201ENST00000331456 ELF3P78545 371 aaPredicted RBP14.02□□□□□ -0.16
TRAIP-201ENST00000331456 KRT72Q14CN4 511 aa14.02□□□□□ -0.16
TRAIP-201ENST00000331456 ZNF789Q5FWF6 425 aa14.02□□□□□ -0.16
TRAIP-201ENST00000331456 PLPP4Q5VZY2 271 aa14.02□□□□□ -0.16
TRAIP-201ENST00000331456 AFTPHQ6ULP2 937 aa14.02□□□□□ -0.16
TRAIP-201ENST00000331456 RTL10Q7L3V2 364 aa14.02□□□□□ -0.16
TRAIP-201ENST00000331456 BBS7Q8IWZ6 715 aa14.02□□□□□ -0.16
TRAIP-201ENST00000331456 MRPL43Q8N983 215 aaKnown RBP14.02□□□□□ -0.16
TRAIP-201ENST00000331456 OR13C4Q8NGS5 318 aa14.02□□□□□ -0.16
TRAIP-201ENST00000331456 CDKN2AIPNLQ96HQ2 116 aa14.02□□□□□ -0.16
TRAIP-201ENST00000331456 NSL1Q96IY1 281 aa14.02□□□□□ -0.16
TRAIP-201ENST00000331456 SUDS3Q9H7L9 328 aaPredicted RBP14.02□□□□□ -0.16
TRAIP-201ENST00000331456 GPAMQ9HCL2 828 aa14.02□□□□□ -0.16
TRAIP-201ENST00000331456 MARCH4Q9P2E8 410 aaPredicted RBP14.02□□□□□ -0.16
TRAIP-201ENST00000331456 XPR1Q9UBH6 696 aa14.02□□□□□ -0.16
TRAIP-201ENST00000331456 RWDD3Q9Y3V2 267 aa14.02□□□□□ -0.16
TRAIP-201ENST00000331456 LEFTY2O00292 366 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 CBX6O95503 412 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 PRLP01236 227 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 LTA4HP09960 611 aaKnown RBP14.02□□□□□ -0.17
TRAIP-201ENST00000331456 T-ENOLP0DO92 83 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 DDX6P26196 483 aaKnown RBP eCLIP14.02□□□□□ -0.17
TRAIP-201ENST00000331456 PMLP29590 882 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 SLC26A3P40879 764 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 ERVFC1P60507 584 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 AP1S1P61966 158 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 KCNJ2P63252 427 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 CSHL1Q14406 222 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 CTC1Q2NKJ3 1217 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 CFAP157Q5JU67 520 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 METTL3Q86U44 580 aaKnown RBP14.02□□□□□ -0.17
TRAIP-201ENST00000331456 ALYREFQ86V81 257 aaKnown RBP14.02□□□□□ -0.17
TRAIP-201ENST00000331456 PACS2Q86VP3 889 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 TMEM151AQ8N4L1 468 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 KIF2BQ8N4N8 673 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 PHOSPHO2Q8TCD6 241 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 HEXDCQ8WVB3 486 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 BHMTQ93088 406 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 ACDQ96AP0 544 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 ALG14Q96F25 216 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 NSMCE3Q96MG7 304 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 GPR78Q96P69 363 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 OLFM1Q99784 485 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 GATA5Q9BWX5 397 aaPredicted RBP14.02□□□□□ -0.17
TRAIP-201ENST00000331456 DNAJC28Q9NX36 388 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 HACD3Q9P035 362 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 KIAA1522Q9P206 1035 aaPredicted RBP14.02□□□□□ -0.17
TRAIP-201ENST00000331456 DNMT3BQ9UBC3 853 aaKnown RBP14.02□□□□□ -0.17
TRAIP-201ENST00000331456 LNPEPQ9UIQ6 1025 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 TRIM33Q9UPN9 1127 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 APOBEC2Q9Y235 224 aaKnown RBP14.02□□□□□ -0.17
TRAIP-201ENST00000331456 SPO11Q9Y5K1 396 aa14.02□□□□□ -0.17
TRAIP-201ENST00000331456 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.01□□□□□ -0.17
TRAIP-201ENST00000331456 ANKRD66B4E2M5 251 aa14.01□□□□□ -0.17
TRAIP-201ENST00000331456 PFDN6O15212 129 aa14.01□□□□□ -0.17
TRAIP-201ENST00000331456 RBP1P09455 135 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms