RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 RBM20Q5T481 1227 aaKnown RBP15□□□□□ -0.01
TPM3-205ENST00000328159 RETSATQ6NUM9 610 aa15□□□□□ -0.01
TPM3-205ENST00000328159 ARID3BQ8IVW6 561 aaPredicted RBP15□□□□□ -0.01
TPM3-205ENST00000328159 CENPLQ8N0S6 344 aaPredicted RBP15□□□□□ -0.01
TPM3-205ENST00000328159 GPR150Q8NGU9 434 aa15□□□□□ -0.01
TPM3-205ENST00000328159 FIBINQ8TAL6 211 aa15□□□□□ -0.01
TPM3-205ENST00000328159 RDH11Q8TC12 318 aa15□□□□□ -0.01
TPM3-205ENST00000328159 ERP27Q96DN0 273 aa15□□□□□ -0.01
TPM3-205ENST00000328159 ADGRE3Q9BY15 652 aa15□□□□□ -0.01
TPM3-205ENST00000328159 NLE1Q9NVX2 485 aaPredicted RBP15□□□□□ -0.01
TPM3-205ENST00000328159 KIAA1522Q9P206 1035 aaPredicted RBP15□□□□□ -0.01
TPM3-205ENST00000328159 CLEC4EQ9ULY5 219 aa15□□□□□ -0.01
TPM3-205ENST00000328159 GRM6O15303 877 aa14.99□□□□□ -0.01
TPM3-205ENST00000328159 CD3EAPO15446 510 aaKnown RBP14.99□□□□□ -0.01
TPM3-205ENST00000328159 ITM2AO43736 263 aa14.99□□□□□ -0.01
TPM3-205ENST00000328159 CLASP2O75122 1294 aaKnown RBP14.99□□□□□ -0.01
TPM3-205ENST00000328159 LYPLA1O75608 230 aaPredicted RBP14.99□□□□□ -0.01
TPM3-205ENST00000328159 MT-CO1P00395 513 aa14.99□□□□□ -0.01
TPM3-205ENST00000328159 CYBBP04839 570 aa14.99□□□□□ -0.01
TPM3-205ENST00000328159 EPCAMP16422 314 aa14.99□□□□□ -0.01
TPM3-205ENST00000328159 LMAN2Q12907 356 aa14.99□□□□□ -0.01
TPM3-205ENST00000328159 ITGA9Q13797 1035 aa14.99□□□□□ -0.01
TPM3-205ENST00000328159 CAMK1Q14012 370 aa14.99□□□□□ -0.01
TPM3-205ENST00000328159 ATXN7L2Q5T6C5 722 aaPredicted RBP14.99□□□□□ -0.01
TPM3-205ENST00000328159 GLT6D1Q7Z4J2 308 aa14.99□□□□□ -0.01
TPM3-205ENST00000328159 LDB1Q86U70 411 aaPredicted RBP14.99□□□□□ -0.01
TPM3-205ENST00000328159 CMTM8Q8IZV2 173 aa14.99□□□□□ -0.01
TPM3-205ENST00000328159 PNPLA1Q8N8W4 532 aa14.99□□□□□ -0.01
TPM3-205ENST00000328159 OR6Y1Q8NGX8 325 aa14.99□□□□□ -0.01
TPM3-205ENST00000328159 ACDQ96AP0 544 aa14.99□□□□□ -0.01
TPM3-205ENST00000328159 TSPAN17Q96FV3 270 aa14.99□□□□□ -0.01
TPM3-205ENST00000328159 SCYL1Q96KG9 808 aa14.99□□□□□ -0.01
TPM3-205ENST00000328159 NDNQ99608 321 aa14.99□□□□□ -0.01
TPM3-205ENST00000328159 ECT2Q9H8V3 914 aa14.99□□□□□ -0.01
TPM3-205ENST00000328159 KCNK4Q9NYG8 393 aa14.99□□□□□ -0.01
TPM3-205ENST00000328159 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.99□□□□□ -0.01
TPM3-205ENST00000328159 CCL26Q9Y258 94 aa14.99□□□□□ -0.01
TPM3-205ENST00000328159 MKI67P46013 3256 aaKnown RBP14.99□□□□□ -0.01
TPM3-205ENST00000328159 NOTCH4Q99466 2003 aa14.99□□□□□ -0.01
TPM3-205ENST00000328159 MYO7AQ13402 2215 aa14.99□□□□□ -0.01
TPM3-205ENST00000328159 H0YHG0 523 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 K7ERQ8 282 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 ARHGEF15O94989 841 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 RHOP08100 348 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 MYL2P10916 166 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 HOXA9P31269 272 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 NCALDP61601 193 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 AP1S1P61966 158 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 ILF2Q12905 390 aaKnown RBP14.98□□□□□ -0.01
TPM3-205ENST00000328159 TSNAXIP1Q2TAA8 658 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 LRRC8EQ6NSJ5 796 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 MRNIPQ6NTE8 343 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 ZYG11AQ6WRX3 759 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 TMEM151AQ8N4L1 468 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 MDGA1Q8NFP4 955 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 OR4L1Q8NH43 312 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 PDCD6IPQ8WUM4 868 aaKnown RBP14.98□□□□□ -0.01
TPM3-205ENST00000328159 SREK1Q8WXA9 508 aaKnown RBP14.98□□□□□ -0.01
TPM3-205ENST00000328159 NXNL1Q96CM4 212 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 CDKN2AIPNLQ96HQ2 116 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 GPR78Q96P69 363 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 SMIM14Q96QK8 99 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 OLFM1Q99784 485 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 CATSPERZQ9NTU4 200 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 CPSF2Q9P2I0 782 aaKnown RBP14.98□□□□□ -0.01
TPM3-205ENST00000328159 HEY2Q9UBP5 337 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 C2orf81A6NN90 581 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 ANKRD66B4E2M5 251 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 KLHL2O95198 593 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 RB1P06400 928 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 HNRNPA1P09651 372 aaKnown RBP eCLIP14.98□□□□□ -0.01
TPM3-205ENST00000328159 SBK3P0C264 359 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 MYOGP15173 224 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 OGNP20774 298 aaKnown RBP14.98□□□□□ -0.01
TPM3-205ENST00000328159 PSMA3P25788 255 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 SLC8A1P32418 973 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 CD70P32970 193 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 GLRBP48167 497 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 ABCE1P61221 599 aaKnown RBP14.98□□□□□ -0.01
TPM3-205ENST00000328159 DLG1Q12959 904 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 PLEKHG6Q3KR16 790 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 HECTD2Q5U5R9 776 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 MTDHQ86UE4 582 aaKnown RBP14.98□□□□□ -0.01
TPM3-205ENST00000328159 USP13Q92995 863 aaPredicted RBP14.98□□□□□ -0.01
TPM3-205ENST00000328159 MARCOQ9UEW3 520 aaPredicted RBP14.98□□□□□ -0.01
TPM3-205ENST00000328159 ZFP69BQ9UJL9 534 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 DNAJC16Q9Y2G8 782 aa14.98□□□□□ -0.01
TPM3-205ENST00000328159 MYOFQ9NZM1 2061 aa14.97□□□□□ -0.01
TPM3-205ENST00000328159 SOBPA7XYQ1 873 aa14.97□□□□□ -0.01
TPM3-205ENST00000328159 TK2O00142 265 aa14.97□□□□□ -0.01
TPM3-205ENST00000328159 SMAD6O43541 496 aaKnown RBP14.97□□□□□ -0.01
TPM3-205ENST00000328159 TRIM13O60858 407 aa14.97□□□□□ -0.01
TPM3-205ENST00000328159 DNAJC6O75061 913 aa14.97□□□□□ -0.01
TPM3-205ENST00000328159 XYLBO75191 536 aa14.97□□□□□ -0.01
TPM3-205ENST00000328159 H2AFYO75367 372 aaKnown RBP14.97□□□□□ -0.01
TPM3-205ENST00000328159 KITP10721 976 aa14.97□□□□□ -0.01
TPM3-205ENST00000328159 ABL2P42684 1182 aa14.97□□□□□ -0.01
TPM3-205ENST00000328159 PLK1P53350 603 aa14.97□□□□□ -0.01
TPM3-205ENST00000328159 SEMA3AQ14563 771 aa14.97□□□□□ -0.01
TPM3-205ENST00000328159 SLC5A9Q2M3M2 681 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms