RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 A0A087X1B8 175 aa17.9■□□□□ 0.46
RAB39A-201ENST00000320578 KIAA0754O94854 1291 aa17.9■□□□□ 0.46
RAB39A-201ENST00000320578 HAUS5O94927 633 aa17.9■□□□□ 0.46
RAB39A-201ENST00000320578 PGLSO95336 258 aa17.9■□□□□ 0.46
RAB39A-201ENST00000320578 S1PR4O95977 384 aa17.9■□□□□ 0.46
RAB39A-201ENST00000320578 STMN1P16949 149 aa17.9■□□□□ 0.46
RAB39A-201ENST00000320578 VASPP50552 380 aaPredicted RBP17.9■□□□□ 0.46
RAB39A-201ENST00000320578 IFT88Q13099 833 aa17.9■□□□□ 0.46
RAB39A-201ENST00000320578 AFTPHQ6ULP2 937 aa17.9■□□□□ 0.46
RAB39A-201ENST00000320578 GLT6D1Q7Z4J2 308 aa17.9■□□□□ 0.46
RAB39A-201ENST00000320578 SDCCAG8Q86SQ7 713 aaPredicted RBP17.9■□□□□ 0.46
RAB39A-201ENST00000320578 RBM23Q86U06 439 aaKnown RBP17.9■□□□□ 0.46
RAB39A-201ENST00000320578 RNF135Q8IUD6 432 aa17.9■□□□□ 0.46
RAB39A-201ENST00000320578 MDGA1Q8NFP4 955 aa17.9■□□□□ 0.46
RAB39A-201ENST00000320578 OR4L1Q8NH43 312 aa17.9■□□□□ 0.46
RAB39A-201ENST00000320578 TUBGCP5Q96RT8 1024 aa17.9■□□□□ 0.46
RAB39A-201ENST00000320578 TCF12Q99081 682 aa17.9■□□□□ 0.46
RAB39A-201ENST00000320578 BBS2Q9BXC9 721 aa17.9■□□□□ 0.46
RAB39A-201ENST00000320578 C1QTNF1Q9BXJ1 281 aa17.9■□□□□ 0.46
RAB39A-201ENST00000320578 KDM4CQ9H3R0 1056 aa17.9■□□□□ 0.46
RAB39A-201ENST00000320578 CAB39LQ9H9S4 337 aa17.9■□□□□ 0.46
RAB39A-201ENST00000320578 MSRAQ9UJ68 235 aa17.9■□□□□ 0.46
RAB39A-201ENST00000320578 FBXO10Q9UK96 956 aa17.9■□□□□ 0.46
RAB39A-201ENST00000320578 ACOT9Q9Y305 439 aa17.9■□□□□ 0.46
RAB39A-201ENST00000320578 CCT8L1PA6NM43 557 aa17.89■□□□□ 0.45
RAB39A-201ENST00000320578 H7C0S8 307 aa17.89■□□□□ 0.45
RAB39A-201ENST00000320578 K7ERQ8 282 aa17.89■□□□□ 0.45
RAB39A-201ENST00000320578 TRAFD1O14545 582 aaPredicted RBP17.89■□□□□ 0.45
RAB39A-201ENST00000320578 CD3EAPO15446 510 aaKnown RBP17.89■□□□□ 0.45
RAB39A-201ENST00000320578 SMAD6O43541 496 aaKnown RBP17.89■□□□□ 0.45
RAB39A-201ENST00000320578 ZNF821O75541 412 aaPredicted RBP17.89■□□□□ 0.45
RAB39A-201ENST00000320578 GOT2P00505 430 aaKnown RBP17.89■□□□□ 0.45
RAB39A-201ENST00000320578 TROVE2P10155 538 aaKnown RBP eCLIP17.89■□□□□ 0.45
RAB39A-201ENST00000320578 PABPC1P11940 636 aaKnown RBP17.89■□□□□ 0.45
RAB39A-201ENST00000320578 SLC26A3P40879 764 aa17.89■□□□□ 0.45
RAB39A-201ENST00000320578 SNRPD1P62314 119 aaKnown RBP17.89■□□□□ 0.45
RAB39A-201ENST00000320578 TYSND1Q2T9J0 566 aa17.89■□□□□ 0.45
RAB39A-201ENST00000320578 TSNAXIP1Q2TAA8 658 aa17.89■□□□□ 0.45
RAB39A-201ENST00000320578 ZNF697Q5TEC3 545 aa17.89■□□□□ 0.45
RAB39A-201ENST00000320578 PTAR1Q7Z6K3 402 aaPredicted RBP17.89■□□□□ 0.45
RAB39A-201ENST00000320578 TTC30BQ8N4P2 665 aa17.89■□□□□ 0.45
RAB39A-201ENST00000320578 CCDC63Q8NA47 563 aa17.89■□□□□ 0.45
RAB39A-201ENST00000320578 ACVR1CQ8NER5 493 aa17.89■□□□□ 0.45
RAB39A-201ENST00000320578 OR2AP1Q8NGE2 309 aa17.89■□□□□ 0.45
RAB39A-201ENST00000320578 TSNARE1Q96NA8 513 aa17.89■□□□□ 0.45
RAB39A-201ENST00000320578 PBX4Q9BYU1 374 aa17.89■□□□□ 0.45
RAB39A-201ENST00000320578 INTS10Q9NVR2 710 aaKnown RBP17.89■□□□□ 0.45
RAB39A-201ENST00000320578 COPG2Q9UBF2 871 aa17.89■□□□□ 0.45
RAB39A-201ENST00000320578 CCDC162PA2VCL2 907 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 SNNO75324 88 aaPredicted RBP17.88■□□□□ 0.45
RAB39A-201ENST00000320578 SLC35E2BP0CK96 405 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 SRCP12931 536 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 TYRP14679 529 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 GRK2P25098 689 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 PRKAA2P54646 552 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 BCL2L1Q07817 233 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 DLG2Q15700 870 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 FUT11Q495W5 492 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 FASTKD1Q53R41 847 aaKnown RBP17.88■□□□□ 0.45
RAB39A-201ENST00000320578 ATXN7L2Q5T6C5 722 aaPredicted RBP17.88■□□□□ 0.45
RAB39A-201ENST00000320578 C16orf46Q6P387 395 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 CNSTQ6PJW8 725 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 RAPH1Q70E73 1250 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 MFSD6LQ8IWD5 586 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 PLD6Q8N2A8 252 aaKnown RBP17.88■□□□□ 0.45
RAB39A-201ENST00000320578 PCDH20Q8N6Y1 951 aaKnown RBP17.88■□□□□ 0.45
RAB39A-201ENST00000320578 OR13C4Q8NGS5 318 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 ITFG1Q8TB96 612 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 PIH1D2Q8WWB5 315 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 MYO19Q96H55 970 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 OMDQ99983 421 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 CPEB1Q9BZB8 566 aaKnown RBP17.88■□□□□ 0.45
RAB39A-201ENST00000320578 LINC00597Q9H2U6 94 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 ATP13A3Q9H7F0 1226 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 FBXO6Q9NRD1 293 aaPredicted RBP17.88■□□□□ 0.45
RAB39A-201ENST00000320578 CATSPERZQ9NTU4 200 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 SLC25A13Q9UJS0 675 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 NEDD8-MDP1E9PL57 170 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 TOP3BO95985 862 aaKnown RBP17.88■□□□□ 0.45
RAB39A-201ENST00000320578 PBX2P40425 430 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 ABCG1P45844 678 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 NRIP1P48552 1158 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 KPNA2P52292 529 aaKnown RBP17.88■□□□□ 0.45
RAB39A-201ENST00000320578 SLC12A2P55011 1212 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 TAS2R39P59534 338 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 TMPRSS15P98073 1019 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 CHI3L2Q15782 390 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 LY6G5CQ5SRR4 150 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 MBLAC2Q68D91 279 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 SLC41A1Q8IVJ1 513 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 CCT6BQ92526 530 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 ELMO2Q96JJ3 720 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 NMRAL1Q9HBL8 299 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 THAP1Q9NVV9 213 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 OBP2AQ9NY56 170 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 VPS9D1Q9Y2B5 631 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 PCDHB9Q9Y5E1 797 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 USH1CQ9Y6N9 552 aa17.88■□□□□ 0.45
RAB39A-201ENST00000320578 A0A1W2PQ67 120 aa17.87■□□□□ 0.45
RAB39A-201ENST00000320578 H2AFYO75367 372 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms