RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 SYBUQ9NX95 663 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 SCML1Q9UN30 329 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 SOX13Q9UN79 622 aa13.67□□□□□ -0.22
PRPF18-201ENST00000320054 PLXND1Q9Y4D7 1925 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 FAM237BA0A1B0GVD1 139 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 HEATR9A2RTY3 570 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 BANF1O75531 89 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 GSTA2P09210 222 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 TSHRP16473 764 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 ELK3P41970 407 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 MAGEA9P43362 315 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 PSMD8P48556 350 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 DGKEP52429 567 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 CCDC15Q0P6D6 951 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 SFSWAPQ12872 951 aaKnown RBP13.66□□□□□ -0.22
PRPF18-201ENST00000320054 GAS6Q14393 721 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 POU6F1Q14863 301 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 SPDYCQ5MJ68 293 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 TMEM92Q6UXU6 159 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 ERN2Q76MJ5 926 aaKnown RBP13.66□□□□□ -0.22
PRPF18-201ENST00000320054 NLRP9Q7RTR0 991 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 MPP5Q8N3R9 675 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 MREGQ8N565 214 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 FBXO36Q8NEA4 188 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 PPHLN1Q8NEY8 458 aaKnown RBP13.66□□□□□ -0.22
PRPF18-201ENST00000320054 PYROXD1Q8WU10 500 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 PEX13Q92968 403 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 RAB7BQ96AH8 199 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 TTC25Q96NG3 672 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 C19orf43Q9BQ61 176 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 WDR83Q9BRX9 315 aaKnown RBP13.66□□□□□ -0.22
PRPF18-201ENST00000320054 POLMQ9NP87 494 aaPredicted RBP13.66□□□□□ -0.22
PRPF18-201ENST00000320054 DYRK4Q9NR20 520 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 SAMD15Q9P1V8 674 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 RIMKLBQ9ULI2 386 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 SIT1Q9Y3P8 196 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 TCAF1Q9Y4C2 921 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 SPO11Q9Y5K1 396 aa13.66□□□□□ -0.22
PRPF18-201ENST00000320054 PLXNA2O75051 1894 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 MROH6A6NGR9 719 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 STK25O00506 426 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 LDB2O43679 373 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 PAPSS2O95340 614 aaPredicted RBP13.65□□□□□ -0.22
PRPF18-201ENST00000320054 CRTAMO95727 393 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 TTC4O95801 387 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 DNTTP04053 509 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 ALPIP09923 528 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 CYP2A6P11509 494 aaPredicted RBP13.65□□□□□ -0.22
PRPF18-201ENST00000320054 CTPS1P17812 591 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 PGAM1P18669 254 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 XPAP23025 273 aaPredicted RBP13.65□□□□□ -0.22
PRPF18-201ENST00000320054 PSMA3P25788 255 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 HNF1BP35680 557 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 NEK3P51956 506 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 PMS2P54278 862 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 CRADDP78560 199 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 PDE1BQ01064 536 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 MTM1Q13496 603 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 FASTKD3Q14CZ7 662 aaKnown RBP13.65□□□□□ -0.22
PRPF18-201ENST00000320054 TAF1AQ15573 450 aaPredicted RBP13.65□□□□□ -0.22
PRPF18-201ENST00000320054 CDKN3Q16667 212 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 STEAP4Q687X5 459 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 CASC4Q6P4E1 433 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 FBXL19Q6PCT2 694 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 TRIM67Q6ZTA4 783 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 DPPA4Q7L190 304 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 TTC7BQ86TV6 843 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 TMEM135Q86UB9 458 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 TMPRSS6Q8IU80 811 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 ANKMY2Q8IV38 441 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 IGDCC3Q8IVU1 814 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 SPEM1Q8N4L4 309 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 BLOC1S5Q8TDH9 187 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 FAM131CQ96AQ9 280 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 C9orf72Q96LT7 481 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 MKRN2Q9H000 416 aaKnown RBP13.65□□□□□ -0.22
PRPF18-201ENST00000320054 PABPC3Q9H361 631 aaKnown RBP13.65□□□□□ -0.22
PRPF18-201ENST00000320054 CDC42EP4Q9H3Q1 356 aaKnown RBP13.65□□□□□ -0.22
PRPF18-201ENST00000320054 NINJ2Q9NZG7 142 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.65□□□□□ -0.22
PRPF18-201ENST00000320054 ZC3H7BQ9UGR2 993 aaKnown RBP13.65□□□□□ -0.22
PRPF18-201ENST00000320054 CHMP2BQ9UQN3 213 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 ZNF711Q9Y462 761 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 MAD1L1Q9Y6D9 718 aa13.65□□□□□ -0.22
PRPF18-201ENST00000320054 TRPM6Q9BX84 2022 aa13.64□□□□□ -0.23
PRPF18-201ENST00000320054 NPIPB15A6NHN6 443 aaPredicted RBP13.64□□□□□ -0.23
PRPF18-201ENST00000320054 C2orf81A6NN90 581 aa13.64□□□□□ -0.23
PRPF18-201ENST00000320054 AREL1O15033 823 aa13.64□□□□□ -0.23
PRPF18-201ENST00000320054 MID1O15344 667 aa13.64□□□□□ -0.23
PRPF18-201ENST00000320054 SLC7A4O43246 635 aa13.64□□□□□ -0.23
PRPF18-201ENST00000320054 SPAG6O75602 509 aa13.64□□□□□ -0.23
PRPF18-201ENST00000320054 USP1O94782 785 aa13.64□□□□□ -0.23
PRPF18-201ENST00000320054 POLBP06746 335 aa13.64□□□□□ -0.23
PRPF18-201ENST00000320054 PIRTP0C851 137 aa13.64□□□□□ -0.23
PRPF18-201ENST00000320054 ADRB3P13945 408 aa13.64□□□□□ -0.23
PRPF18-201ENST00000320054 VIPR1P32241 457 aa13.64□□□□□ -0.23
PRPF18-201ENST00000320054 DRD3P35462 400 aa13.64□□□□□ -0.23
PRPF18-201ENST00000320054 P2RY2P41231 377 aa13.64□□□□□ -0.23
PRPF18-201ENST00000320054 ABL2P42684 1182 aa13.64□□□□□ -0.23
PRPF18-201ENST00000320054 METAP1P53582 386 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms