RNA–Protein interactions for RNA: ENST00000319294.10

UBASH3A-202, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best) BASIC

Gene UBASH3A, Length 2,504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-202ENST00000319294 RANBP9Q96S59 729 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 PDFQ9HBH1 243 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 GKN1Q9NS71 199 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 PCDH10Q9P2E7 1040 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 SLC7A8Q9UHI5 535 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 SORCS3Q9UPU3 1222 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 A0A088AWK7 358 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 TMEM233B4DJY2 109 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 H7C4K7 107 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 MATN2O00339 956 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 TM7SF2O76062 418 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 SEC24AO95486 1093 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 KLKB1P03952 638 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 APOA4P06727 396 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 TFEBP19484 476 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 EPHA3P29320 983 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 CRABP2P29373 138 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 GRIA2P42262 883 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 TNK2Q07912 1038 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 GALNT3Q14435 633 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 TBCCQ15814 346 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 PARP15Q460N3 678 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 RPS27LQ71UM5 84 aaKnown RBP12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 CCNYL1Q8N7R7 359 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 SLAIN1Q8ND83 568 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 ZNF296Q8WUU4 475 aaPredicted RBP12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 ANKRD49Q8WVL7 239 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 TBATAQ96M53 351 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 SMIM14Q96QK8 99 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 PREBQ9HCU5 417 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 RAP2CQ9Y3L5 183 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 ARL5AQ9Y689 179 aa12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 ZFP37Q9Y6Q3 630 aaPredicted RBP12.44□□□□□ -0.42
UBASH3A-202ENST00000319294 ACSL4O60488 711 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 HOXD9P28356 352 aaPredicted RBP12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 RGRP47804 291 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 LEPRP48357 1165 aaKnown RBP12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 SCNN1BP51168 640 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 INHBCP55103 352 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 EML3Q32P44 896 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 TMEM207Q6UWW9 146 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 MYLK4Q86YV6 388 aaPredicted RBP12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 CILP2Q8IUL8 1156 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 EFCAB3Q8N7B9 438 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 DTNBP1Q96EV8 351 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 TTLL2Q9BWV7 592 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 NUF2Q9BZD4 464 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 VCX3BQ9H321 246 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 VCX3AQ9NNX9 186 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 NDE1Q9NXR1 346 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 F5H5T6 163 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 H3BNC9 293 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 S1PR4O95977 384 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 PRSS56P0CW18 603 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 ATP5C1P36542 298 aaKnown RBP12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 POLD2P49005 469 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 RPL14P50914 215 aaKnown RBP12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 CDKN2DP55273 166 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 YBEYP58557 167 aaPredicted RBP12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 POU4F1Q01851 419 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 LSAMPQ13449 338 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 FRMD7Q6ZUT3 714 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 DENND1CQ8IV53 801 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 OR13C4Q8NGS5 318 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 BLOC1S5Q8TDH9 187 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 SREK1Q8WXA9 508 aaKnown RBP12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 ZNF512Q96ME7 567 aaPredicted RBP12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 CENPKQ9BS16 269 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 TMEM175Q9BSA9 504 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 SPON2Q9BUD6 331 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 MRPL46Q9H2W6 279 aaKnown RBP12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 CYP4F12Q9HCS2 524 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 MID2Q9UJV3 735 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 DNMT3LQ9UJW3 386 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 CRYL1Q9Y2S2 319 aa12.43□□□□□ -0.42
UBASH3A-202ENST00000319294 ZNF840PA6NDX5 716 aa12.42□□□□□ -0.42
UBASH3A-202ENST00000319294 F8W8V4 182 aa12.42□□□□□ -0.42
UBASH3A-202ENST00000319294 SCAMP3O14828 347 aaKnown RBP12.42□□□□□ -0.42
UBASH3A-202ENST00000319294 COCHO43405 550 aa12.42□□□□□ -0.42
UBASH3A-202ENST00000319294 H2AFYO75367 372 aaKnown RBP12.42□□□□□ -0.42
UBASH3A-202ENST00000319294 OR6B1O95007 311 aa12.42□□□□□ -0.42
UBASH3A-202ENST00000319294 PAPSS2O95340 614 aaPredicted RBP12.42□□□□□ -0.42
UBASH3A-202ENST00000319294 CCDC166P0CW27 439 aa12.42□□□□□ -0.42
UBASH3A-202ENST00000319294 MYL4P12829 197 aa12.42□□□□□ -0.42
UBASH3A-202ENST00000319294 KCNC1P48547 511 aa12.42□□□□□ -0.42
UBASH3A-202ENST00000319294 MAPKAPK2P49137 400 aa12.42□□□□□ -0.42
UBASH3A-202ENST00000319294 SLC12A2P55011 1212 aa12.42□□□□□ -0.42
UBASH3A-202ENST00000319294 ELAVL2Q12926 359 aaKnown RBP12.42□□□□□ -0.42
UBASH3A-202ENST00000319294 KLF10Q13118 480 aa12.42□□□□□ -0.42
UBASH3A-202ENST00000319294 SEMA3AQ14563 771 aa12.42□□□□□ -0.42
UBASH3A-202ENST00000319294 LSM12Q3MHD2 195 aaKnown RBP12.42□□□□□ -0.42
UBASH3A-202ENST00000319294 TMCO4Q5TGY1 634 aa12.42□□□□□ -0.42
UBASH3A-202ENST00000319294 HECTD2Q5U5R9 776 aa12.42□□□□□ -0.42
UBASH3A-202ENST00000319294 TMEM198Q66K66 360 aa12.42□□□□□ -0.42
UBASH3A-202ENST00000319294 SLC8B1Q6J4K2 584 aa12.42□□□□□ -0.42
UBASH3A-202ENST00000319294 KIAA0408Q6ZU52 694 aa12.42□□□□□ -0.42
UBASH3A-202ENST00000319294 TMCO2Q7Z6W1 182 aaPredicted RBP12.42□□□□□ -0.42
UBASH3A-202ENST00000319294 TRIM74Q86UV6 250 aa12.42□□□□□ -0.42
UBASH3A-202ENST00000319294 TRIM73Q86UV7 250 aa12.42□□□□□ -0.42
UBASH3A-202ENST00000319294 PIM3Q86V86 326 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms