RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 CXCL8P10145 99 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 PTPN3P26045 913 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 NOS2P35228 1153 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 DPP6P42658 865 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 FAM187BQ17R55 369 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 IQSEC1Q6DN90 963 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 PMF1Q6P1K2 205 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 CRTC3Q6UUV7 619 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 MMAAQ8IVH4 418 aaKnown RBP4.8□□□□□ -1.64
PTPN13-201ENST00000316707 KHSRPQ92945 711 aaKnown RBP eCLIP4.8□□□□□ -1.64
PTPN13-201ENST00000316707 WNT8BQ93098 351 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 SLCO4A1Q96BD0 722 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 FBXL8Q96CD0 374 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 SH3YL1Q96HL8 342 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-201ENST00000316707 HEPHQ9BQS7 1158 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 MCMBPQ9BTE3 642 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 MAGEB5Q9BZ81 275 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 VTA1Q9NP79 307 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-201ENST00000316707 MFSD11O43934 449 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 BCAS1O75363 584 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-201ENST00000316707 KRT75O95678 551 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 CPB1P15086 417 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 GOT1P17174 413 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 IMPDH1P20839 514 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 ADRA1BP35368 520 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 GSSP48637 474 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 RPL34P49207 117 aaKnown RBP4.8□□□□□ -1.64
PTPN13-201ENST00000316707 CRADDP78560 199 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 CDC20Q12834 499 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 PHKG1Q16816 387 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 ATG14Q6ZNE5 492 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 CENPLQ8N0S6 344 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-201ENST00000316707 TMEM151AQ8N4L1 468 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 SVOPQ8N4V2 548 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 GRIN3AQ8TCU5 1115 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 RORBQ92753 470 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 ATXN7L3BQ96GX2 97 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 SNX18Q96RF0 628 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 TSPAN18Q96SJ8 248 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 UGT2B28Q9BY64 529 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 ARMC7Q9H6L4 198 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 CAB39LQ9H9S4 337 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 FANCEQ9HB96 536 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 SDR39U1Q9NRG7 319 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-201ENST00000316707 GPRC5DQ9NZD1 345 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 ANKMY1Q9P2S6 941 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 SATB2Q9UPW6 733 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 PDE10AQ9Y233 779 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 CLRN2A0PK11 232 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 SOCS2O14508 198 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 HBP1O60381 514 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 MGEA5O60502 916 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 KRT8P05787 483 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 FGF4P08620 206 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 THRBP10828 461 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 MRPL19P49406 292 aaKnown RBP4.8□□□□□ -1.64
PTPN13-201ENST00000316707 TAS2R39P59534 338 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 SCAPQ12770 1279 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 ACAP2Q15057 778 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 MAPRE1Q15691 268 aaKnown RBP4.8□□□□□ -1.64
PTPN13-201ENST00000316707 FSCN1Q16658 493 aaKnown RBP4.8□□□□□ -1.64
PTPN13-201ENST00000316707 KIF19Q2TAC6 998 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 ANKDD1AQ495B1 522 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 CYBRD1Q53TN4 286 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 C8orf82Q6P1X6 216 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-201ENST00000316707 LAYNQ6UX15 382 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 CDR2LQ86X02 465 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-201ENST00000316707 FAM131BQ86XD5 332 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 ZDHHC13Q8IUH4 622 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 SVOPLQ8N434 492 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 ADAM32Q8TC27 787 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 MAGEE2Q8TD90 523 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-201ENST00000316707 TRIM63Q969Q1 353 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 BTN2A3PQ96KV6 586 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 ZNF560Q96MR9 790 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 SP140LQ9H930 580 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 NECTIN3Q9NQS3 549 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 FBXO8Q9NRD0 319 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 PCDHGB4Q9UN71 923 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 TPRKBQ9Y3C4 175 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 PCDHGB5Q9Y5G0 923 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 RGS13O14921 159 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 NFICP08651 508 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 SAT1P21673 171 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 PNPLA4P41247 253 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 RAP1GAPP47736 663 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 GLRBP48167 497 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 FAM98BQ52LJ0 330 aaKnown RBP4.8□□□□□ -1.64
PTPN13-201ENST00000316707 IGFN1Q86VF2 1251 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 ATP6V0D2Q8N8Y2 350 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 RASSF5Q8WWW0 418 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 HDAC11Q96DB2 347 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 GPR78Q96P69 363 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 GBA3Q9H227 469 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 RPAP3Q9H6T3 665 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-201ENST00000316707 ENTPD7Q9NQZ7 604 aa4.8□□□□□ -1.64
PTPN13-201ENST00000316707 UNCXA6NJT0 531 aa4.79□□□□□ -1.64
PTPN13-201ENST00000316707 EVPLLA8MZ36 301 aa4.79□□□□□ -1.64
PTPN13-201ENST00000316707 KCNK1O00180 336 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms