RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 TTC39CQ8N584 583 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 TRIM15Q9C019 465 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 TSPYL2Q9H2G4 693 aaPredicted RBP14.74□□□□□ -0.05
COL6A2-202ENST00000310645 MEAF6Q9HAF1 191 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 AS3MTQ9HBK9 375 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 MAP10Q9P2G4 905 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 GNPTGQ9UJJ9 305 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 SARDHQ9UL12 918 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 ERGIC3Q9Y282 383 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 TCAF1Q9Y4C2 921 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 CITO14578 2027 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 TRIM64CA6NLI5 447 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 DCLK1O15075 740 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 GAS2O43903 313 aaKnown RBP14.74□□□□□ -0.05
COL6A2-202ENST00000310645 BAG6P46379 1132 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 RPS9P46781 194 aaKnown RBP14.74□□□□□ -0.05
COL6A2-202ENST00000310645 IREB2P48200 963 aaKnown RBP14.74□□□□□ -0.05
COL6A2-202ENST00000310645 PAFAH1B3Q15102 231 aaKnown RBP14.74□□□□□ -0.05
COL6A2-202ENST00000310645 UGP2Q16851 508 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 FAM45BPQ6NSW5 357 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 FAM117BQ6P1L5 589 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 CATSPERGQ6ZRH7 1159 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 FAM45AQ8TCE6 357 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 ADAMTS16Q8TE57 1224 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 ZMAT2Q96NC0 199 aaKnown RBP14.74□□□□□ -0.05
COL6A2-202ENST00000310645 BEGAINQ9BUH8 593 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 DGCR6LQ9BY27 220 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 SNTG2Q9NY99 539 aa14.74□□□□□ -0.05
COL6A2-202ENST00000310645 RBM47A0AV96 593 aaKnown RBP14.73□□□□□ -0.05
COL6A2-202ENST00000310645 ARPC2O15144 300 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 E2F6O75461 281 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 SULT1C4O75897 302 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 IPO13O94829 963 aaKnown RBP14.73□□□□□ -0.05
COL6A2-202ENST00000310645 ALDOCP09972 364 aaKnown RBP14.73□□□□□ -0.05
COL6A2-202ENST00000310645 CYP2C8P10632 490 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 JAK1P23458 1154 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 NOS2P35228 1153 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 APLP1P51693 650 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 TNFAIP1Q13829 316 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 SPIDRQ14159 915 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 ZNF789Q5FWF6 425 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 NAPEPLDQ6IQ20 393 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 PACRGLQ8N7B6 248 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 MUS81Q96NY9 551 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 MCMBPQ9BTE3 642 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 C1orf50Q9BV19 199 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 R3HDMLQ9H3Y0 253 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 PCDH12Q9NPG4 1184 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 HOXC10Q9NYD6 342 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.73□□□□□ -0.05
COL6A2-202ENST00000310645 RCOR3Q9P2K3 495 aaPredicted RBP14.73□□□□□ -0.05
COL6A2-202ENST00000310645 KRBA1A5PL33 1030 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 DYNC1LI2O43237 492 aaPredicted RBP14.73□□□□□ -0.05
COL6A2-202ENST00000310645 HUS1O60921 280 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 PMPCBO75439 489 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 YBX3P16989 372 aaKnown RBP eCLIP14.73□□□□□ -0.05
COL6A2-202ENST00000310645 BDNFP23560 247 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 CCT8P50990 548 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 PIGFQ07326 219 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 ATP6AP1Q15904 470 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 CYBRD1Q53TN4 286 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 RABL3Q5HYI8 236 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 BTBD8Q5XKL5 378 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 ZNF354CQ86Y25 554 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 IFNLR1Q8IU57 520 aaPredicted RBP14.73□□□□□ -0.05
COL6A2-202ENST00000310645 SNX19Q92543 992 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 DUS3LQ96G46 650 aaKnown RBP14.73□□□□□ -0.05
COL6A2-202ENST00000310645 AKTIPQ9H8T0 292 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 CMTM6Q9NX76 183 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 NSMCE4AQ9NXX6 385 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 GTF2IRD1Q9UHL9 959 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 SOBPA7XYQ1 873 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 PPP6CO00743 305 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 SYNCRIPO60506 623 aaKnown RBP14.73□□□□□ -0.05
COL6A2-202ENST00000310645 RAD23AP54725 363 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 TMTC4Q5T4D3 741 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 TMEM214Q6NUQ4 689 aaKnown RBP14.73□□□□□ -0.05
COL6A2-202ENST00000310645 ADGRG5Q8IZF4 528 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 SLC7A5P1Q8MH63 180 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 CASP10Q92851 521 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 HPS1Q92902 700 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 FAR2Q96K12 515 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 DOK1Q99704 481 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 SEZ6LQ9BYH1 1024 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 BRD8Q9H0E9 1235 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 ALG9Q9H6U8 611 aa14.73□□□□□ -0.05
COL6A2-202ENST00000310645 UBFD1O14562 309 aaKnown RBP14.72□□□□□ -0.05
COL6A2-202ENST00000310645 ACOX3O15254 700 aa14.72□□□□□ -0.05
COL6A2-202ENST00000310645 CLASP2O75122 1294 aaKnown RBP14.72□□□□□ -0.05
COL6A2-202ENST00000310645 RASAL1O95294 804 aa14.72□□□□□ -0.05
COL6A2-202ENST00000310645 ALBP02768 609 aa14.72□□□□□ -0.05
COL6A2-202ENST00000310645 CAPN3P20807 821 aa14.72□□□□□ -0.05
COL6A2-202ENST00000310645 CD151P48509 253 aa14.72□□□□□ -0.05
COL6A2-202ENST00000310645 OTUD1Q5VV17 481 aaPredicted RBP14.72□□□□□ -0.05
COL6A2-202ENST00000310645 PKN3Q6P5Z2 889 aa14.72□□□□□ -0.05
COL6A2-202ENST00000310645 TBPL2Q6SJ96 375 aa14.72□□□□□ -0.05
COL6A2-202ENST00000310645 ANKRD13AQ8IZ07 590 aa14.72□□□□□ -0.05
COL6A2-202ENST00000310645 TRUB1Q8WWH5 349 aaKnown RBP14.72□□□□□ -0.05
COL6A2-202ENST00000310645 HDAC11Q96DB2 347 aa14.72□□□□□ -0.05
COL6A2-202ENST00000310645 FICDQ9BVA6 458 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms