RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 ARTNQ5T4W7 220 aa11.9□□□□□ -0.5
SMIM4-201ENST00000307106 ACBD5Q5T8D3 534 aaPredicted RBP11.9□□□□□ -0.5
SMIM4-201ENST00000307106 NKAIN2Q5VXU1 208 aa11.9□□□□□ -0.5
SMIM4-201ENST00000307106 SLC26A9Q7LBE3 791 aa11.9□□□□□ -0.5
SMIM4-201ENST00000307106 TIPARPQ7Z3E1 657 aaKnown RBP11.9□□□□□ -0.5
SMIM4-201ENST00000307106 C17orf82Q86X59 251 aaPredicted RBP11.9□□□□□ -0.5
SMIM4-201ENST00000307106 WDTC1Q8N5D0 677 aa11.9□□□□□ -0.5
SMIM4-201ENST00000307106 BMPERQ8N8U9 685 aa11.9□□□□□ -0.5
SMIM4-201ENST00000307106 ZDHHC1Q8WTX9 485 aa11.9□□□□□ -0.5
SMIM4-201ENST00000307106 FUBP1Q96AE4 644 aaKnown RBP11.9□□□□□ -0.5
SMIM4-201ENST00000307106 NPY6RQ99463 290 aa11.9□□□□□ -0.5
SMIM4-201ENST00000307106 GTPBP4Q9BZE4 634 aaKnown RBP11.9□□□□□ -0.5
SMIM4-201ENST00000307106 ZYG11BQ9C0D3 744 aa11.9□□□□□ -0.5
SMIM4-201ENST00000307106 CYP4F12Q9HCS2 524 aa11.9□□□□□ -0.5
SMIM4-201ENST00000307106 SPATS2LQ9NUQ6 558 aaKnown RBP11.9□□□□□ -0.5
SMIM4-201ENST00000307106 RRN3Q9NYV6 651 aa11.9□□□□□ -0.5
SMIM4-201ENST00000307106 MOSPD1Q9UJG1 213 aa11.9□□□□□ -0.5
SMIM4-201ENST00000307106 CFAP45Q9UL16 551 aa11.9□□□□□ -0.5
SMIM4-201ENST00000307106 KELP23276 732 aa11.89□□□□□ -0.51
SMIM4-201ENST00000307106 ETFBP38117 255 aa11.89□□□□□ -0.51
SMIM4-201ENST00000307106 PRCPP42785 496 aa11.89□□□□□ -0.51
SMIM4-201ENST00000307106 GPR3P46089 330 aa11.89□□□□□ -0.51
SMIM4-201ENST00000307106 PMS1P54277 932 aaKnown RBP11.89□□□□□ -0.51
SMIM4-201ENST00000307106 SLC6A3Q01959 620 aa11.89□□□□□ -0.51
SMIM4-201ENST00000307106 DEUP1Q05D60 604 aa11.89□□□□□ -0.51
SMIM4-201ENST00000307106 AGERQ15109 404 aa11.89□□□□□ -0.51
SMIM4-201ENST00000307106 ANKRD40Q6AI12 368 aa11.89□□□□□ -0.51
SMIM4-201ENST00000307106 LEKR1Q6ZMV7 388 aa11.89□□□□□ -0.51
SMIM4-201ENST00000307106 PASD1Q8IV76 773 aa11.89□□□□□ -0.51
SMIM4-201ENST00000307106 PLA2G15Q8NCC3 412 aa11.89□□□□□ -0.51
SMIM4-201ENST00000307106 GDAP1L1Q96MZ0 367 aa11.89□□□□□ -0.51
SMIM4-201ENST00000307106 CTRCQ99895 268 aa11.89□□□□□ -0.51
SMIM4-201ENST00000307106 ZNF768Q9H5H4 540 aaKnown RBP11.89□□□□□ -0.51
SMIM4-201ENST00000307106 TMEM9Q9P0T7 183 aa11.89□□□□□ -0.51
SMIM4-201ENST00000307106 DKK3Q9UBP4 350 aa11.89□□□□□ -0.51
SMIM4-201ENST00000307106 RCOR1Q9UKL0 485 aa11.89□□□□□ -0.51
SMIM4-201ENST00000307106 STAP1Q9ULZ2 295 aa11.89□□□□□ -0.51
SMIM4-201ENST00000307106 PCDHB3Q9Y5E6 796 aa11.89□□□□□ -0.51
SMIM4-201ENST00000307106 MRPS18BQ9Y676 258 aaKnown RBP11.89□□□□□ -0.51
SMIM4-201ENST00000307106 IGHV1OR21-1A0A087WYE8 117 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 TRIM49BA6NDI0 452 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 TNFRSF10CO14798 259 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 P4HA2O15460 535 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 STK17BO94768 372 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 ECEL1O95672 775 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 F13A1P00488 732 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 F9P00740 461 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 PDGFAP04085 211 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 ERBB2P04626 1255 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 FGF1P05230 155 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 CCNB1P14635 433 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 MAN1A1P33908 653 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 SUOXP51687 545 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 NDUFA8P51970 172 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 TSR1Q2NL82 804 aaKnown RBP11.88□□□□□ -0.51
SMIM4-201ENST00000307106 C1QL3Q5VWW1 255 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 ATL3Q6DD88 541 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 TMEM71Q6P5X7 295 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 CEACAM20Q6UY09 585 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 ZNF397Q8NF99 534 aaPredicted RBP11.88□□□□□ -0.51
SMIM4-201ENST00000307106 PGAP3Q96FM1 320 aaPredicted RBP11.88□□□□□ -0.51
SMIM4-201ENST00000307106 HMCESQ96FZ2 354 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 DPYSL5Q9BPU6 564 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 TTYH3Q9C0H2 523 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 ZMYND15Q9H091 742 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 TRIT1Q9H3H1 467 aaKnown RBP11.88□□□□□ -0.51
SMIM4-201ENST00000307106 NDFIP2Q9NV92 336 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.88□□□□□ -0.51
SMIM4-201ENST00000307106 TLK1Q9UKI8 766 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 HPCAL4Q9UM19 191 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 TMEM184BQ9Y519 407 aaPredicted RBP11.88□□□□□ -0.51
SMIM4-201ENST00000307106 POLQO75417 2590 aa11.88□□□□□ -0.51
SMIM4-201ENST00000307106 PRSS38A1L453 326 aa11.87□□□□□ -0.51
SMIM4-201ENST00000307106 RFPL1O75677 317 aa11.87□□□□□ -0.51
SMIM4-201ENST00000307106 TMCC1O94876 653 aa11.87□□□□□ -0.51
SMIM4-201ENST00000307106 IGSF6O95976 241 aa11.87□□□□□ -0.51
SMIM4-201ENST00000307106 ZSCAN22P10073 491 aaPredicted RBP11.87□□□□□ -0.51
SMIM4-201ENST00000307106 BMP6P22004 513 aa11.87□□□□□ -0.51
SMIM4-201ENST00000307106 STAT5AP42229 794 aa11.87□□□□□ -0.51
SMIM4-201ENST00000307106 LIG3P49916 1009 aa11.87□□□□□ -0.51
SMIM4-201ENST00000307106 RNASE9P60153 205 aaKnown RBP11.87□□□□□ -0.51
SMIM4-201ENST00000307106 MC2RQ01718 297 aa11.87□□□□□ -0.51
SMIM4-201ENST00000307106 DNM1Q05193 864 aaKnown RBP11.87□□□□□ -0.51
SMIM4-201ENST00000307106 SQSTM1Q13501 440 aa11.87□□□□□ -0.51
SMIM4-201ENST00000307106 ERV3-1Q14264 604 aa11.87□□□□□ -0.51
SMIM4-201ENST00000307106 EIF2S3LQ2VIR3 472 aaKnown RBP11.87□□□□□ -0.51
SMIM4-201ENST00000307106 KRBA2Q6ZNG9 492 aa11.87□□□□□ -0.51
SMIM4-201ENST00000307106 EHBP1Q8NDI1 1231 aa11.87□□□□□ -0.51
SMIM4-201ENST00000307106 PATE1Q8WXA2 126 aa11.87□□□□□ -0.51
SMIM4-201ENST00000307106 NT5C3BQ969T7 300 aa11.87□□□□□ -0.51
SMIM4-201ENST00000307106 TBCBQ99426 244 aa11.87□□□□□ -0.51
SMIM4-201ENST00000307106 ZPBPQ9BS86 351 aa11.87□□□□□ -0.51
SMIM4-201ENST00000307106 GSDMCQ9BYG8 508 aa11.87□□□□□ -0.51
SMIM4-201ENST00000307106 SYNCQ9H7C4 482 aa11.87□□□□□ -0.51
SMIM4-201ENST00000307106 SUDS3Q9H7L9 328 aaPredicted RBP11.87□□□□□ -0.51
SMIM4-201ENST00000307106 UBE2TQ9NPD8 197 aaPredicted RBP11.87□□□□□ -0.51
SMIM4-201ENST00000307106 PCDH12Q9NPG4 1184 aa11.87□□□□□ -0.51
SMIM4-201ENST00000307106 PPARGC1AQ9UBK2 798 aaKnown RBP11.87□□□□□ -0.51
SMIM4-201ENST00000307106 DNAI1Q9UI46 699 aa11.87□□□□□ -0.51
SMIM4-201ENST00000307106 POLHQ9Y253 713 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms