RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 CREB1P16220 341 aa17.61■□□□□ 0.41
KRT28-201ENST00000306658 ARNTP27540 789 aa17.61■□□□□ 0.41
KRT28-201ENST00000306658 GKP32189 559 aa17.61■□□□□ 0.41
KRT28-201ENST00000306658 GJA4P35212 333 aa17.61■□□□□ 0.41
KRT28-201ENST00000306658 MDH1P40925 334 aaKnown RBP17.61■□□□□ 0.41
KRT28-201ENST00000306658 EIF2DP41214 584 aaKnown RBP17.61■□□□□ 0.41
KRT28-201ENST00000306658 CSE1LP55060 971 aaKnown RBP17.61■□□□□ 0.41
KRT28-201ENST00000306658 ACVR1Q04771 509 aa17.61■□□□□ 0.41
KRT28-201ENST00000306658 ITPRIPL2Q3MIP1 535 aa17.61■□□□□ 0.41
KRT28-201ENST00000306658 MROH9Q5TGP6 573 aa17.61■□□□□ 0.41
KRT28-201ENST00000306658 NEPROQ6NW34 567 aa17.61■□□□□ 0.41
KRT28-201ENST00000306658 LMNTD2Q8IXW0 634 aa17.61■□□□□ 0.41
KRT28-201ENST00000306658 NDUFAF2Q8N183 169 aa17.61■□□□□ 0.41
KRT28-201ENST00000306658 FRS2Q8WU20 508 aa17.61■□□□□ 0.41
KRT28-201ENST00000306658 PIH1D2Q8WWB5 315 aa17.61■□□□□ 0.41
KRT28-201ENST00000306658 SUV39H2Q9H5I1 410 aa17.61■□□□□ 0.41
KRT28-201ENST00000306658 ZDHHC6Q9H6R6 413 aa17.61■□□□□ 0.41
KRT28-201ENST00000306658 MAGEE1Q9HCI5 957 aa17.61■□□□□ 0.41
KRT28-201ENST00000306658 SPO11Q9Y5K1 396 aa17.61■□□□□ 0.41
KRT28-201ENST00000306658 TTC34A8MYJ7 566 aa17.6■□□□□ 0.41
KRT28-201ENST00000306658 WASH3PC4AMC7 463 aa17.6■□□□□ 0.41
KRT28-201ENST00000306658 SIN3BO75182 1162 aa17.6■□□□□ 0.41
KRT28-201ENST00000306658 ITGA2BP08514 1039 aa17.6■□□□□ 0.41
KRT28-201ENST00000306658 LPOP22079 712 aaPredicted RBP17.6■□□□□ 0.41
KRT28-201ENST00000306658 ABL2P42684 1182 aa17.6■□□□□ 0.41
KRT28-201ENST00000306658 PTPRNQ16849 979 aa17.6■□□□□ 0.41
KRT28-201ENST00000306658 TIFABQ6ZNK6 161 aa17.6■□□□□ 0.41
KRT28-201ENST00000306658 NUDT18Q6ZVK8 323 aa17.6■□□□□ 0.41
KRT28-201ENST00000306658 C4orf33Q8N1A6 199 aa17.6■□□□□ 0.41
KRT28-201ENST00000306658 KDM1BQ8NB78 822 aa17.6■□□□□ 0.41
KRT28-201ENST00000306658 MDGA1Q8NFP4 955 aa17.6■□□□□ 0.41
KRT28-201ENST00000306658 OR2A12Q8NGT7 310 aa17.6■□□□□ 0.41
KRT28-201ENST00000306658 OR6P1Q8NGX9 317 aa17.6■□□□□ 0.41
KRT28-201ENST00000306658 MYLIPQ8WY64 445 aa17.6■□□□□ 0.41
KRT28-201ENST00000306658 HDAC10Q969S8 669 aa17.6■□□□□ 0.41
KRT28-201ENST00000306658 FAM161BQ96MY7 647 aa17.6■□□□□ 0.41
KRT28-201ENST00000306658 RBBP8Q99708 897 aa17.6■□□□□ 0.41
KRT28-201ENST00000306658 MFSD1Q9H3U5 465 aa17.6■□□□□ 0.41
KRT28-201ENST00000306658 NLE1Q9NVX2 485 aaPredicted RBP17.6■□□□□ 0.41
KRT28-201ENST00000306658 NKIRAS1Q9NYS0 192 aa17.6■□□□□ 0.41
KRT28-201ENST00000306658 KCTD3Q9Y597 815 aa17.6■□□□□ 0.41
KRT28-201ENST00000306658 C5orf42Q9H799 3197 aa17.6■□□□□ 0.41
KRT28-201ENST00000306658 TBC1D3BA6NDS4 549 aa17.59■□□□□ 0.41
KRT28-201ENST00000306658 PRRT4C9JH25 899 aa17.59■□□□□ 0.41
KRT28-201ENST00000306658 PRPF4O43172 522 aaKnown RBP eCLIP17.59■□□□□ 0.41
KRT28-201ENST00000306658 RPP40O75818 363 aaKnown RBP17.59■□□□□ 0.41
KRT28-201ENST00000306658 CHN1P15882 459 aa17.59■□□□□ 0.41
KRT28-201ENST00000306658 OPRD1P41143 372 aa17.59■□□□□ 0.41
KRT28-201ENST00000306658 SLC18A1P54219 525 aa17.59■□□□□ 0.41
KRT28-201ENST00000306658 KDSRQ06136 332 aa17.59■□□□□ 0.41
KRT28-201ENST00000306658 BMPR2Q13873 1038 aa17.59■□□□□ 0.41
KRT28-201ENST00000306658 KIAA0408Q6ZU52 694 aa17.59■□□□□ 0.41
KRT28-201ENST00000306658 TERB1Q8NA31 727 aa17.59■□□□□ 0.41
KRT28-201ENST00000306658 TTC8Q8TAM2 541 aa17.59■□□□□ 0.41
KRT28-201ENST00000306658 MDM1Q8TC05 714 aa17.59■□□□□ 0.41
KRT28-201ENST00000306658 UCMAQ8WVF2 138 aa17.59■□□□□ 0.41
KRT28-201ENST00000306658 SPOCK2Q92563 424 aa17.59■□□□□ 0.41
KRT28-201ENST00000306658 DNAJC1Q96KC8 554 aaKnown RBP17.59■□□□□ 0.41
KRT28-201ENST00000306658 HEPHQ9BQS7 1158 aa17.59■□□□□ 0.41
KRT28-201ENST00000306658 RPP25Q9BUL9 199 aaKnown RBP17.59■□□□□ 0.41
KRT28-201ENST00000306658 BRD9Q9H8M2 597 aa17.59■□□□□ 0.41
KRT28-201ENST00000306658 PHTF1Q9UMS5 762 aa17.59■□□□□ 0.41
KRT28-201ENST00000306658 NUMBLQ9Y6R0 609 aa17.59■□□□□ 0.41
KRT28-201ENST00000306658 A0A0J9YYE9 177 aa17.58■□□□□ 0.41
KRT28-201ENST00000306658 HMX2A2RU54 273 aa17.58■□□□□ 0.41
KRT28-201ENST00000306658 FAM47DPA6NHR8 397 aa17.58■□□□□ 0.41
KRT28-201ENST00000306658 TRBC1P01850 177 aa17.58■□□□□ 0.41
KRT28-201ENST00000306658 ZNF140P52738 457 aaPredicted RBP17.58■□□□□ 0.41
KRT28-201ENST00000306658 LIMK2P53671 638 aa17.58■□□□□ 0.41
KRT28-201ENST00000306658 GABPB1Q06547 395 aaPredicted RBP17.58■□□□□ 0.41
KRT28-201ENST00000306658 ZNF470Q6ECI4 717 aa17.58■□□□□ 0.41
KRT28-201ENST00000306658 OR13C4Q8NGS5 318 aa17.58■□□□□ 0.41
KRT28-201ENST00000306658 NXPE3Q969Y0 559 aa17.58■□□□□ 0.41
KRT28-201ENST00000306658 ECHDC3Q96DC8 303 aa17.58■□□□□ 0.41
KRT28-201ENST00000306658 SERAC1Q96JX3 654 aa17.58■□□□□ 0.41
KRT28-201ENST00000306658 TBATAQ96M53 351 aa17.58■□□□□ 0.41
KRT28-201ENST00000306658 INTS9Q9NV88 658 aaKnown RBP17.58■□□□□ 0.41
KRT28-201ENST00000306658 ANHXE9PGG2 379 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 H3BQ06 376 aaPredicted RBP17.58■□□□□ 0.4
KRT28-201ENST00000306658 GOLGA8RI6L899 631 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 AURKAO14965 403 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 STX7O15400 261 aaKnown RBP17.58■□□□□ 0.4
KRT28-201ENST00000306658 BUD23O43709 281 aaKnown RBP17.58■□□□□ 0.4
KRT28-201ENST00000306658 SPAG7O75391 227 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 PYGBP11216 843 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 CTPS1P17812 591 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 PSMA3P25788 255 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 HADHAP40939 763 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 ARSDP51689 593 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 POLR2LP62875 67 aaKnown RBP17.58■□□□□ 0.4
KRT28-201ENST00000306658 TMPRSS15P98073 1019 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 GUCY1A3Q02108 690 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 SLC18A2Q05940 514 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 MESP2Q0VG99 397 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 HTR4Q13639 388 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 GDPD4Q6W3E5 623 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 PTAR1Q7Z6K3 402 aaPredicted RBP17.58■□□□□ 0.4
KRT28-201ENST00000306658 PHTF2Q8N3S3 785 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 BANPQ8N9N5 519 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 CHST14Q8NCH0 376 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms