RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 LRCH4O75427 683 aa20.62■□□□□ 0.89
RER1-201ENST00000306256 TCEA3O75764 348 aa20.62■□□□□ 0.89
RER1-201ENST00000306256 C1QL1O75973 258 aa20.62■□□□□ 0.89
RER1-201ENST00000306256 ALPIP09923 528 aa20.62■□□□□ 0.89
RER1-201ENST00000306256 RBMS1P29558 406 aaKnown RBP20.62■□□□□ 0.89
RER1-201ENST00000306256 MTM1Q13496 603 aa20.62■□□□□ 0.89
RER1-201ENST00000306256 DPYSQ14117 519 aa20.62■□□□□ 0.89
RER1-201ENST00000306256 SPIDRQ14159 915 aa20.62■□□□□ 0.89
RER1-201ENST00000306256 SCG3Q8WXD2 468 aaKnown RBP20.62■□□□□ 0.89
RER1-201ENST00000306256 CCDC74AQ96AQ1 378 aa20.62■□□□□ 0.89
RER1-201ENST00000306256 ECHDC3Q96DC8 303 aa20.62■□□□□ 0.89
RER1-201ENST00000306256 PRR11Q96HE9 360 aaPredicted RBP20.62■□□□□ 0.89
RER1-201ENST00000306256 WDR92Q96MX6 357 aa20.62■□□□□ 0.89
RER1-201ENST00000306256 CPNE5Q9HCH3 593 aa20.62■□□□□ 0.89
RER1-201ENST00000306256 MYO1AQ9UBC5 1043 aa20.62■□□□□ 0.89
RER1-201ENST00000306256 GPR34Q9UPC5 381 aa20.62■□□□□ 0.89
RER1-201ENST00000306256 TEX51A0A1B0GUA7 166 aa20.61■□□□□ 0.89
RER1-201ENST00000306256 TTC24A2A3L6 582 aaPredicted RBP20.61■□□□□ 0.89
RER1-201ENST00000306256 A8MX80 341 aa20.61■□□□□ 0.89
RER1-201ENST00000306256 KLK10O43240 276 aa20.61■□□□□ 0.89
RER1-201ENST00000306256 RECQL5O94762 991 aaPredicted RBP20.61■□□□□ 0.89
RER1-201ENST00000306256 SKILP12757 684 aa20.61■□□□□ 0.89
RER1-201ENST00000306256 SCNN1BP51168 640 aa20.61■□□□□ 0.89
RER1-201ENST00000306256 BCL2L1Q07817 233 aa20.61■□□□□ 0.89
RER1-201ENST00000306256 IL10RBQ08334 325 aa20.61■□□□□ 0.89
RER1-201ENST00000306256 AGERQ15109 404 aa20.61■□□□□ 0.89
RER1-201ENST00000306256 BROXQ5VW32 411 aa20.61■□□□□ 0.89
RER1-201ENST00000306256 LIPIQ6XZB0 460 aa20.61■□□□□ 0.89
RER1-201ENST00000306256 FNIP1Q8TF40 1166 aa20.61■□□□□ 0.89
RER1-201ENST00000306256 OR1E3Q8WZA6 343 aa20.61■□□□□ 0.89
RER1-201ENST00000306256 GRAMD1AQ96CP6 724 aa20.61■□□□□ 0.89
RER1-201ENST00000306256 SLC46A1Q96NT5 459 aa20.61■□□□□ 0.89
RER1-201ENST00000306256 AIPL1Q9NZN9 384 aa20.61■□□□□ 0.89
RER1-201ENST00000306256 COL6A6A6NMZ7 2263 aa20.61■□□□□ 0.89
RER1-201ENST00000306256 GCN1Q92616 2671 aaKnown RBP20.61■□□□□ 0.89
RER1-201ENST00000306256 ELFN1P0C7U0 828 aa20.6■□□□□ 0.89
RER1-201ENST00000306256 GZMAP12544 262 aa20.6■□□□□ 0.89
RER1-201ENST00000306256 TCF4P15884 667 aa20.6■□□□□ 0.89
RER1-201ENST00000306256 PRKCIP41743 596 aa20.6■□□□□ 0.89
RER1-201ENST00000306256 TMPRSS3P57727 454 aa20.6■□□□□ 0.89
RER1-201ENST00000306256 KLHL30Q0D2K2 578 aa20.6■□□□□ 0.89
RER1-201ENST00000306256 SLC10A7Q0GE19 358 aa20.6■□□□□ 0.89
RER1-201ENST00000306256 SMTNL2Q2TAL5 461 aa20.6■□□□□ 0.89
RER1-201ENST00000306256 FILIP1LQ4L180 1135 aa20.6■□□□□ 0.89
RER1-201ENST00000306256 LVRNQ6Q4G3 990 aa20.6■□□□□ 0.89
RER1-201ENST00000306256 IGF2-ASQ6U949 168 aa20.6■□□□□ 0.89
RER1-201ENST00000306256 DPPA4Q7L190 304 aa20.6■□□□□ 0.89
RER1-201ENST00000306256 B3GNT8Q7Z7M8 397 aa20.6■□□□□ 0.89
RER1-201ENST00000306256 GKN2Q86XP6 184 aa20.6■□□□□ 0.89
RER1-201ENST00000306256 SDR16C5Q8N3Y7 309 aa20.6■□□□□ 0.89
RER1-201ENST00000306256 ATL2Q8NHH9 583 aa20.6■□□□□ 0.89
RER1-201ENST00000306256 FUBP1Q96AE4 644 aaKnown RBP20.6■□□□□ 0.89
RER1-201ENST00000306256 NAP1L5Q96NT1 182 aaPredicted RBP20.6■□□□□ 0.89
RER1-201ENST00000306256 BPIFA3Q9BQP9 254 aa20.6■□□□□ 0.89
RER1-201ENST00000306256 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.6■□□□□ 0.892e-6■□□□□ 9.4
RER1-201ENST00000306256 FGF22Q9HCT0 170 aa20.6■□□□□ 0.89
RER1-201ENST00000306256 MRPL40Q9NQ50 206 aaKnown RBP20.6■□□□□ 0.89
RER1-201ENST00000306256 ZFC3H1O60293 1989 aaKnown RBP20.59■□□□□ 0.89
RER1-201ENST00000306256 TMEM202A6NGA9 273 aa20.59■□□□□ 0.89
RER1-201ENST00000306256 NTN3O00634 580 aaPredicted RBP20.59■□□□□ 0.89
RER1-201ENST00000306256 TRAFD1O14545 582 aaPredicted RBP20.59■□□□□ 0.89
RER1-201ENST00000306256 TNFP01375 233 aa20.59■□□□□ 0.89
RER1-201ENST00000306256 GM2AP17900 193 aa20.59■□□□□ 0.89
RER1-201ENST00000306256 IL1R2P27930 398 aa20.59■□□□□ 0.89
RER1-201ENST00000306256 KIAA1024LP59773 190 aa20.59■□□□□ 0.89
RER1-201ENST00000306256 RFTN1Q14699 578 aaPredicted RBP20.59■□□□□ 0.89
RER1-201ENST00000306256 LBRQ14739 615 aaKnown RBP20.59■□□□□ 0.89
RER1-201ENST00000306256 ARHGAP40Q5TG30 622 aa20.59■□□□□ 0.89
RER1-201ENST00000306256 TMCO4Q5TGY1 634 aa20.59■□□□□ 0.89
RER1-201ENST00000306256 PCSK4Q6UW60 755 aa20.59■□□□□ 0.89
RER1-201ENST00000306256 PSTKQ8IV42 348 aaKnown RBP20.59■□□□□ 0.89
RER1-201ENST00000306256 PELI3Q8N2H9 469 aa20.59■□□□□ 0.89
RER1-201ENST00000306256 WDR36Q8NI36 951 aaKnown RBP20.59■□□□□ 0.89
RER1-201ENST00000306256 WDR48Q8TAF3 677 aa20.59■□□□□ 0.89
RER1-201ENST00000306256 PSKH2Q96QS6 385 aa20.59■□□□□ 0.89
RER1-201ENST00000306256 ETNK2Q9NVF9 386 aa20.59■□□□□ 0.89
RER1-201ENST00000306256 SEPT3Q9UH03 358 aa20.59■□□□□ 0.89
RER1-201ENST00000306256 PCDHGA8Q9Y5G5 932 aa20.59■□□□□ 0.89
RER1-201ENST00000306256 SCINQ9Y6U3 715 aa20.59■□□□□ 0.89
RER1-201ENST00000306256 CCDC187A0A096LP49 1063 aa20.58■□□□□ 0.89
RER1-201ENST00000306256 A0A1B0GTH6 734 aa20.58■□□□□ 0.89
RER1-201ENST00000306256 A0A1W2PQC6 194 aa20.58■□□□□ 0.89
RER1-201ENST00000306256 CFAP69A5D8W1 941 aa20.58■□□□□ 0.89
RER1-201ENST00000306256 SMTNL1A8MU46 457 aa20.58■□□□□ 0.89
RER1-201ENST00000306256 H3BRJ5 948 aa20.58■□□□□ 0.89
RER1-201ENST00000306256 TK2O00142 265 aa20.58■□□□□ 0.89
RER1-201ENST00000306256 CACNB4O00305 520 aaPredicted RBP20.58■□□□□ 0.89
RER1-201ENST00000306256 AMPD1P23109 780 aa20.58■□□□□ 0.89
RER1-201ENST00000306256 HCAR3P49019 387 aa20.58■□□□□ 0.89
RER1-201ENST00000306256 AP1S1P61966 158 aa20.58■□□□□ 0.89
RER1-201ENST00000306256 CCL7P80098 99 aa20.58■□□□□ 0.89
RER1-201ENST00000306256 NSUN2Q08J23 767 aaKnown RBP eCLIP20.58■□□□□ 0.89
RER1-201ENST00000306256 C19orf57Q0VDD7 668 aa20.58■□□□□ 0.89
RER1-201ENST00000306256 SFTPA2Q8IWL1 248 aa20.58■□□□□ 0.89
RER1-201ENST00000306256 HSPH1Q92598 858 aa20.58■□□□□ 0.89
RER1-201ENST00000306256 RBM15Q96T37 977 aaKnown RBP eCLIP20.58■□□□□ 0.893e-7■■□□□ 13.6
RER1-201ENST00000306256 FOXP3Q9BZS1 431 aa20.58■□□□□ 0.89
RER1-201ENST00000306256 ZWILCHQ9H900 591 aa20.58■□□□□ 0.89
RER1-201ENST00000306256 B4GALT6Q9UBX8 382 aa20.58■□□□□ 0.89
RER1-201ENST00000306256 DGKBQ9Y6T7 804 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms