RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 PEX11BO96011 259 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 LTA4HP09960 611 aaKnown RBP15.2■□□□□ 0.02
CSDC2-201ENST00000306149 HSPA1AP0DMV8 641 aaKnown RBP15.2■□□□□ 0.02
CSDC2-201ENST00000306149 HSPA1BP0DMV9 641 aaKnown RBP15.2■□□□□ 0.02
CSDC2-201ENST00000306149 FGFR3P22607 806 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 HOXC13P31276 330 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 SERPINH1P50454 418 aaKnown RBP15.2■□□□□ 0.02
CSDC2-201ENST00000306149 MYBPC1Q00872 1141 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 TSPY1Q01534 308 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 FASTKQ14296 549 aaKnown RBP15.2■□□□□ 0.02
CSDC2-201ENST00000306149 AGAP9Q5VTM2 703 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 OR52K2Q8NGK3 314 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.2■□□□□ 0.02
CSDC2-201ENST00000306149 GIMAP2Q9UG22 337 aa15.2■□□□□ 0.02
CSDC2-201ENST00000306149 CNOT11Q9UKZ1 510 aaKnown RBP15.2■□□□□ 0.02
CSDC2-201ENST00000306149 PSMD12O00232 456 aaPredicted RBP15.19■□□□□ 0.02
CSDC2-201ENST00000306149 GPC4O75487 556 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 MLLT6P55198 1093 aaPredicted RBP15.19■□□□□ 0.02
CSDC2-201ENST00000306149 PFKPQ01813 784 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 TIGD7Q6NT04 549 aaPredicted RBP15.19■□□□□ 0.02
CSDC2-201ENST00000306149 CIR1Q86X95 450 aaPredicted RBP15.19■□□□□ 0.02
CSDC2-201ENST00000306149 TRPV1Q8NER1 839 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 PSMG2Q969U7 264 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 ADAM2Q99965 735 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 RBM38Q9H0Z9 239 aaKnown RBP15.19■□□□□ 0.02
CSDC2-201ENST00000306149 PTGDR2Q9Y5Y4 395 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 MIA3Q5JRA6 1907 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 HEATR9A2RTY3 570 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 C9JVG2 144 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 B4GALT3O60512 393 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 PIRTP0C851 137 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 SPATA31D3P0C874 917 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 DNAJB13P59910 316 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 APOFQ13790 326 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 RBM44Q6ZP01 1051 aaKnown RBP15.19■□□□□ 0.02
CSDC2-201ENST00000306149 SPATA31D4Q6ZUB0 917 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 METTL25Q8N6Q8 603 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 TMEM102Q8N9M5 508 aaPredicted RBP15.19■□□□□ 0.02
CSDC2-201ENST00000306149 PTCD2Q8WV60 388 aaKnown RBP15.19■□□□□ 0.02
CSDC2-201ENST00000306149 SLC25A51Q9H1U9 297 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 TBC1D13Q9NVG8 400 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 CACNA2D2Q9NY47 1150 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 UTP6Q9NYH9 597 aaKnown RBP15.19■□□□□ 0.02
CSDC2-201ENST00000306149 VWA7Q9Y334 891 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 A0A1B0GTW7 788 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 PRORSD1PA6NEY8 169 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 LRRC14BA6NHZ5 514 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 TRIM38O00635 465 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 HMBSP08397 361 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 GRK4P32298 578 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 PSMD8P48556 350 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 TAF1CQ15572 869 aaPredicted RBP15.19■□□□□ 0.02
CSDC2-201ENST00000306149 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.19■□□□□ 0.02
CSDC2-201ENST00000306149 NADK2Q4G0N4 442 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 REP15Q6BDI9 236 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 CILP2Q8IUL8 1156 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 THEM5Q8N1Q8 247 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 C3orf30Q96M34 536 aa15.19■□□□□ 0.02
CSDC2-201ENST00000306149 PRPF18Q99633 342 aaKnown RBP15.19■□□□□ 0.02
CSDC2-201ENST00000306149 MRM3Q9HC36 420 aaKnown RBP15.19■□□□□ 0.02
CSDC2-201ENST00000306149 ANKRD12Q6UB98 2062 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 GPR182O15218 404 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 TRPA1O75762 1119 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 PENKP01210 267 aaPredicted RBP15.18■□□□□ 0.02
CSDC2-201ENST00000306149 CYP11A1P05108 521 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 MMP2P08253 660 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 NELFEP18615 380 aaKnown RBP15.18■□□□□ 0.02
CSDC2-201ENST00000306149 LEPRP48357 1165 aaKnown RBP15.18■□□□□ 0.02
CSDC2-201ENST00000306149 PSMD5Q16401 504 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 FBXO48Q5FWF7 155 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 MARC1Q5VT66 337 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 AFMIDQ63HM1 303 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 KLC3Q6P597 504 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 B3GNT6Q6ZMB0 384 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 CYHR1Q6ZMK1 362 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 MRPL10Q7Z7H8 261 aaKnown RBP15.18■□□□□ 0.02
CSDC2-201ENST00000306149 LRTOMTQ8WZ04 291 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 LPGAT1Q92604 370 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 ASB9Q96DX5 294 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 IMP4Q96G21 291 aaKnown RBP15.18■□□□□ 0.02
CSDC2-201ENST00000306149 MPP4Q96JB8 637 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 SLC2A11Q9BYW1 496 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 PRKD2Q9BZL6 878 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 MRGBPQ9NV56 204 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 ATXN10Q9UBB4 475 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 SUCOQ9UBS9 1254 aaKnown RBP15.18■□□□□ 0.02
CSDC2-201ENST00000306149 PADI4Q9UM07 663 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 TRAF6Q9Y4K3 522 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 M0QZQ0 153 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 FAM58BPP0C7Q3 252 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 KPNA2P52292 529 aaKnown RBP15.18■□□□□ 0.02
CSDC2-201ENST00000306149 USP46P62068 366 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 PRAMEP78395 509 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 YWHAHQ04917 246 aaPredicted RBP15.18■□□□□ 0.02
CSDC2-201ENST00000306149 LRP8Q14114 963 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 TRIM25Q14258 630 aaKnown RBP15.18■□□□□ 0.02
CSDC2-201ENST00000306149 CHSY3Q70JA7 882 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 MIB1Q86YT6 1006 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 ALDH16A1Q8IZ83 802 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 FAM110BQ8TC76 370 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms