RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 COX16Q9P0S2 106 aa18.95■□□□□ 0.62
CHRNB1-201ENST00000306071 ATP11BQ9Y2G3 1177 aa18.95■□□□□ 0.62
CHRNB1-201ENST00000306071 UBR3Q6ZT12 1888 aa18.95■□□□□ 0.62
CHRNB1-201ENST00000306071 YDJCA8MPS7 323 aa18.95■□□□□ 0.62
CHRNB1-201ENST00000306071 FAM47E-STBD1D6RA91 191 aa18.95■□□□□ 0.62
CHRNB1-201ENST00000306071 ABCB7O75027 752 aa18.95■□□□□ 0.62
CHRNB1-201ENST00000306071 EIF2S1P05198 315 aaKnown RBP18.95■□□□□ 0.62
CHRNB1-201ENST00000306071 MTHFD1P11586 935 aaKnown RBP18.95■□□□□ 0.62
CHRNB1-201ENST00000306071 LCP1P13796 627 aa18.95■□□□□ 0.62
CHRNB1-201ENST00000306071 GFAPP14136 432 aa18.95■□□□□ 0.62
CHRNB1-201ENST00000306071 TPTEP56180 551 aa18.95■□□□□ 0.62
CHRNB1-201ENST00000306071 ADARB1P78563 741 aaKnown RBP18.95■□□□□ 0.62
CHRNB1-201ENST00000306071 IQSEC1Q6DN90 963 aa18.95■□□□□ 0.62
CHRNB1-201ENST00000306071 IFNEQ86WN2 208 aa18.95■□□□□ 0.62
CHRNB1-201ENST00000306071 ANKRD13BQ86YJ7 626 aa18.95■□□□□ 0.62
CHRNB1-201ENST00000306071 FUNDC1Q8IVP5 155 aa18.95■□□□□ 0.62
CHRNB1-201ENST00000306071 RNF139Q8WU17 664 aa18.95■□□□□ 0.62
CHRNB1-201ENST00000306071 SLC35F5Q8WV83 523 aa18.95■□□□□ 0.62
CHRNB1-201ENST00000306071 RPL10LQ96L21 214 aaKnown RBP18.95■□□□□ 0.62
CHRNB1-201ENST00000306071 C11orf84Q9BUA3 381 aaPredicted RBP18.95■□□□□ 0.62
CHRNB1-201ENST00000306071 VTA1Q9NP79 307 aa18.95■□□□□ 0.62
CHRNB1-201ENST00000306071 NOX1Q9Y5S8 564 aa18.95■□□□□ 0.62
CHRNB1-201ENST00000306071 PSME4Q14997 1843 aa18.95■□□□□ 0.62
CHRNB1-201ENST00000306071 A8MU76 341 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 TOR1BO14657 336 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 BCAS1O75363 584 aaPredicted RBP18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 GPIP06744 558 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 PTPN3P26045 913 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 RFC2P35250 354 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 TRIM32Q13049 653 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 VPS26BQ4G0F5 336 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 OTUD3Q5T2D3 398 aaPredicted RBP18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 MFSD4BQ5TF39 518 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 GTF2IRD2BQ6EKJ0 949 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 DSG4Q86SJ6 1040 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 GTF2IRD2Q86UP8 949 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 PARP8Q8N3A8 854 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 TTC30BQ8N4P2 665 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 HEXDCQ8WVB3 486 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 MAGED4Q96JG8 741 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 DGCR6LQ9BY27 220 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 TRIM8Q9BZR9 551 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 MAP10Q9P2G4 905 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 A0A0J9YYE9 177 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 FAM95CA0A1B0GW59 222 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 ANGPT2O15123 496 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 HSD17B1P14061 328 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 TCEA1P23193 301 aaKnown RBP18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 NPY2RP49146 381 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 STAT5BP51692 787 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 PLK1P53350 603 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 CTBP1Q13363 440 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 AQP6Q13520 282 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 MXD4Q14582 209 aaPredicted RBP18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 CLPPQ16740 277 aaPredicted RBP18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 FAM83EQ2M2I3 478 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 CLEC6AQ6EIG7 209 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 PRMT9Q6P2P2 845 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 OTUD5Q96G74 571 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 FUNDC2Q9BWH2 189 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 C2orf40Q9H1Z8 148 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 INTS10Q9NVR2 710 aaKnown RBP18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 UBP1Q9NZI7 540 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 ANKMY1Q9P2S6 941 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 FZD10Q9ULW2 581 aa18.94■□□□□ 0.62
CHRNB1-201ENST00000306071 TTC24A2A3L6 582 aaPredicted RBP18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 ACKR2O00590 384 aa18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 ZBTB24O43167 697 aaPredicted RBP18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 LDLRP01130 860 aa18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 GJB1P08034 283 aa18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 STAG3L1P0CL83 205 aa18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 TKTP29401 623 aaKnown RBP18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 DNAJB13P59910 316 aa18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 POLD3Q15054 466 aaPredicted RBP18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 RNF135Q8IUD6 432 aa18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 ZDHHC17Q8IUH5 632 aa18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 DENND6AQ8IWF6 608 aa18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 GOLM1Q8NBJ4 401 aa18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 ELMO2Q96JJ3 720 aa18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 PCYT2Q99447 389 aa18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 ABCD2Q9UBJ2 740 aa18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 MTRRQ9UBK8 725 aa18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 BBIP1A8MTZ0 92 aa18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 RSL1D1O76021 490 aaKnown RBP18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 AXLP30530 894 aa18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 LEPRP48357 1165 aaKnown RBP18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 IFITM3Q01628 133 aa18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 SELENBP1Q13228 472 aa18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 MAPRE1Q15691 268 aaKnown RBP18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 PKDCCQ504Y2 493 aa18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 PTCD2Q8WV60 388 aaKnown RBP18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 PCDH12Q9NPG4 1184 aa18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 SETD4Q9NVD3 440 aa18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 CMTM6Q9NX76 183 aa18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 RCOR3Q9P2K3 495 aaPredicted RBP18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 KLHL3Q9UH77 587 aa18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 SCAF8Q9UPN6 1271 aaKnown RBP18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 V9GYQ6 96 aa18.93■□□□□ 0.62
CHRNB1-201ENST00000306071 C9JVG2 144 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms