RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 UBXN10Q96LJ8 280 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.57□□□□□ -1.36
USP47-201ENST00000305481 DNMT3BQ9UBC3 853 aaKnown RBP6.57□□□□□ -1.36
USP47-201ENST00000305481 MAFFQ9ULX9 164 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 CLEC4EQ9ULY5 219 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 CRYL1Q9Y2S2 319 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 CHD9Q3L8U1 2897 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 A0A087X1B8 175 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 A0A0U1RQS6 177 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 TMEM114B3SHH9 223 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 BAIAP3O94812 1187 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 LATS1O95835 1130 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 MT-CO1P00395 513 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 GJA1P17302 382 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 CLCN5P51795 746 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 ALDH18A1P54886 795 aaKnown RBP6.57□□□□□ -1.36
USP47-201ENST00000305481 UBAP2LQ14157 1087 aaKnown RBP6.57□□□□□ -1.36
USP47-201ENST00000305481 CSHL1Q14406 222 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 PABPC1LQ4VXU2 614 aaKnown RBP6.57□□□□□ -1.36
USP47-201ENST00000305481 LIPMQ5VYY2 423 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 PIM3Q86V86 326 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 BBS5Q8N3I7 341 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 FBXO27Q8NI29 283 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 PEX13Q92968 403 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 CLP1Q92989 425 aaKnown RBP6.57□□□□□ -1.36
USP47-201ENST00000305481 SCYL1Q96KG9 808 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 NUDCD1Q96RS6 583 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 DDX50Q9BQ39 737 aaKnown RBP6.57□□□□□ -1.36
USP47-201ENST00000305481 SIKE1Q9BRV8 207 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 CADM1Q9BY67 442 aaKnown RBP6.57□□□□□ -1.36
USP47-201ENST00000305481 DRC3Q9H069 523 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 IL23AQ9NPF7 189 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 SCUBE2Q9NQ36 999 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 CXXC1Q9P0U4 656 aaPredicted RBP6.57□□□□□ -1.36
USP47-201ENST00000305481 LHX3Q9UBR4 397 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 VWA7Q9Y334 891 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 RANBP2P49792 3224 aaKnown RBP6.57□□□□□ -1.36
USP47-201ENST00000305481 DOCK6Q96HP0 2047 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 NEMP2A6NFY4 417 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 H0Y626 953 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 K7ERQ8 282 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 CD3EAPO15446 510 aaKnown RBP6.57□□□□□ -1.36
USP47-201ENST00000305481 RPP40O75818 363 aaKnown RBP6.57□□□□□ -1.36
USP47-201ENST00000305481 LUC7L3O95232 432 aaKnown RBP6.57□□□□□ -1.36
USP47-201ENST00000305481 SERPINA6P08185 405 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 KCNA5P22460 613 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 PSMA3P25788 255 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 SLC8A1P32418 973 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 CSKP41240 450 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 KCNC1P48547 511 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 NAGLUP54802 743 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 ERVFC1P60507 584 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 TRAF2Q12933 501 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 ARL13AQ5H913 290 aaPredicted RBP6.57□□□□□ -1.36
USP47-201ENST00000305481 DNAJC14Q6Y2X3 702 aaPredicted RBP6.57□□□□□ -1.36
USP47-201ENST00000305481 ZNF783Q6ZMS7 281 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 ITIH5Q86UX2 942 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 LONP2Q86WA8 852 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 TXNDC5Q8NBS9 432 aaKnown RBP6.57□□□□□ -1.36
USP47-201ENST00000305481 TTC16Q8NEE8 873 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 AGR3Q8TD06 166 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 PPP4R1Q8TF05 950 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 TMA16Q96EY4 203 aaKnown RBP6.57□□□□□ -1.36
USP47-201ENST00000305481 CDKN2AIPNLQ96HQ2 116 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 RILPQ96NA2 401 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 BTBD10Q9BSF8 475 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 COG4Q9H9E3 785 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 NLE1Q9NVX2 485 aaPredicted RBP6.57□□□□□ -1.36
USP47-201ENST00000305481 DNAJC28Q9NX36 388 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 TAS2R1Q9NYW7 299 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 VPS51Q9UID3 782 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 RAI2Q9Y5P3 530 aa6.57□□□□□ -1.36
USP47-201ENST00000305481 PRR5-ARHGAP8B1AHC4 643 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 CXCL14O95715 111 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 HSPA4LO95757 839 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 GLP2RO95838 553 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 CALB2P22676 271 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 MPSTP25325 297 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 CA8P35219 290 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 CCR2P41597 374 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 RASSF2P50749 326 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 ARHGAP8P85298 464 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 NSUN2Q08J23 767 aaKnown RBP eCLIP6.56□□□□□ -1.36
USP47-201ENST00000305481 SNCBQ16143 134 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 TECRLQ5HYJ1 363 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 NCEH1Q6PIU2 408 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 EPGNQ6UW88 154 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 BBS7Q8IWZ6 715 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 LMNTD2Q8IXW0 634 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 APCDD1Q8J025 514 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 FAM13CQ8NE31 585 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 RMDN1Q96DB5 314 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 SGF29Q96ES7 293 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 MRPL57Q9BQC6 102 aaKnown RBP6.56□□□□□ -1.36
USP47-201ENST00000305481 SMG9Q9H0W8 520 aaKnown RBP6.56□□□□□ -1.36
USP47-201ENST00000305481 CDH19Q9H159 772 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 MRPL46Q9H2W6 279 aaKnown RBP6.56□□□□□ -1.36
USP47-201ENST00000305481 GPAMQ9HCL2 828 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 CD248Q9HCU0 757 aa6.56□□□□□ -1.36
USP47-201ENST00000305481 MAN1C1Q9NR34 630 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms