RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 FUT4P22083 530 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 FASP25445 335 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 B3GNT6Q6ZMB0 384 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 PIM3Q86V86 326 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 ATAD1Q8NBU5 361 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 MTFMTQ96DP5 389 aaKnown RBP14.11□□□□□ -0.15
SDC2-201ENST00000302190 DGCR6LQ9BY27 220 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 MYO7AQ13402 2215 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 NT5C1B-RDH14C9J2C7 533 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 FFAR3O14843 346 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 GPR42O15529 346 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 SYNCRIPO60506 623 aaKnown RBP14.11□□□□□ -0.15
SDC2-201ENST00000302190 CRTAMO95727 393 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 DHRS4L1P0CG22 281 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 DAOAP59103 153 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 POLD3Q15054 466 aaPredicted RBP14.11□□□□□ -0.15
SDC2-201ENST00000302190 ZFP1Q6P2D0 407 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.11□□□□□ -0.153e-7■■■■■ 29.4
SDC2-201ENST00000302190 SLC25A23Q9BV35 468 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 GBA3Q9H227 469 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 SPAG4Q9NPE6 437 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 DNAJC28Q9NX36 388 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 GABRQQ9UN88 632 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 VWA7Q9Y334 891 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 TMEM88BA6NKF7 163 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 TRIM38O00635 465 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 SLC2A3P11169 496 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 ELNP15502 786 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 UGT1A6P19224 532 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 TRAF2Q12933 501 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 C16orf59Q7L2K0 433 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 RALGPS2Q86X27 583 aaPredicted RBP14.11□□□□□ -0.15
SDC2-201ENST00000302190 FBXO30Q8TB52 745 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 ASIC4Q96FT7 647 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 KCTD14Q9BQ13 255 aaPredicted RBP14.11□□□□□ -0.15
SDC2-201ENST00000302190 FAM105AQ9NUU6 356 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 SPATA7Q9P0W8 599 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 TRMT6Q9UJA5 497 aaKnown RBP14.11□□□□□ -0.15
SDC2-201ENST00000302190 SH3GLB1Q9Y371 365 aa14.11□□□□□ -0.15
SDC2-201ENST00000302190 COPG1Q9Y678 874 aaKnown RBP14.11□□□□□ -0.15
SDC2-201ENST00000302190 LCTP09848 1927 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 KANSL1LA0AUZ9 987 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 E7ENX8 843 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 STRNO43815 780 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 INCA1Q0VD86 236 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 CCNIQ14094 377 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 FSCN1Q16658 493 aaKnown RBP14.1□□□□□ -0.15
SDC2-201ENST00000302190 INSCQ1MX18 579 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 DUSP28Q4G0W2 176 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 ATP6AP1LQ52LC2 224 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 SAMD4BQ5PRF9 694 aaKnown RBP14.1□□□□□ -0.15
SDC2-201ENST00000302190 GPRIN1Q7Z2K8 1008 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 NPWQ8N729 165 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 ZNF784Q8NCA9 323 aaPredicted RBP14.1□□□□□ -0.15
SDC2-201ENST00000302190 ACTRT2Q8TDY3 377 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 RPL10LQ96L21 214 aaKnown RBP14.1□□□□□ -0.15
SDC2-201ENST00000302190 TEKT5Q96M29 485 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 MRPL57Q9BQC6 102 aaKnown RBP14.1□□□□□ -0.15
SDC2-201ENST00000302190 PAAF1Q9BRP4 392 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 CNGB3Q9NQW8 809 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 MOCS1Q9NZB8 636 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.1□□□□□ -0.152e-6■■■■□ 21.8
SDC2-201ENST00000302190 ADAM28Q9UKQ2 775 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 KCTD3Q9Y597 815 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 C1orf232A0A0U1RR37 186 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 TCRBV5S1A1TA0A578 114 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 H3BMM5 538 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 NRP2O60462 931 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 GGT5P36269 586 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 RGS2P41220 211 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 AFF1P51825 1210 aaKnown RBP14.1□□□□□ -0.15
SDC2-201ENST00000302190 LSM3P62310 102 aaKnown RBP14.1□□□□□ -0.15
SDC2-201ENST00000302190 NADK2Q4G0N4 442 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 CTXN3Q4LDR2 81 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 GPR107Q5VW38 600 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 VPS33AQ96AX1 596 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 ENTPD7Q9NQZ7 604 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 AURKAO14965 403 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 SNAI1O95863 264 aaPredicted RBP14.1□□□□□ -0.15
SDC2-201ENST00000302190 GRK4P32298 578 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 ENPEPQ07075 957 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 FRG1Q14331 258 aaKnown RBP14.1□□□□□ -0.15
SDC2-201ENST00000302190 ZBTB8BQ8NAP8 495 aaPredicted RBP14.1□□□□□ -0.15
SDC2-201ENST00000302190 OR6K2Q8NGY2 324 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 METTL6Q8TCB7 284 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 VAT1Q99536 393 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 CINPQ9BW66 212 aaPredicted RBP14.1□□□□□ -0.15
SDC2-201ENST00000302190 SLC39A8Q9C0K1 460 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 C6orf203Q9P0P8 240 aaPredicted RBP14.1□□□□□ -0.15
SDC2-201ENST00000302190 U3KQV3 271 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 KIAA0100Q14667 2235 aaKnown RBP14.1□□□□□ -0.15
SDC2-201ENST00000302190 SDK1Q7Z5N4 2213 aa14.1□□□□□ -0.15
SDC2-201ENST00000302190 EVPLQ92817 2033 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 FOXD2O60548 495 aaPredicted RBP14.09□□□□□ -0.15
SDC2-201ENST00000302190 FKBP9O95302 570 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 HSPA1AP0DMV8 641 aaKnown RBP14.09□□□□□ -0.15
SDC2-201ENST00000302190 HSPA1BP0DMV9 641 aaKnown RBP14.09□□□□□ -0.15
SDC2-201ENST00000302190 ECT2LQ008S8 904 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 TIGD7Q6NT04 549 aaPredicted RBP14.09□□□□□ -0.15
SDC2-201ENST00000302190 FKBP9P1Q75LS8 142 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms