RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 PSD2Q9BQI7 771 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 RAD21L1Q9H4I0 556 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 LRRC4Q9HBW1 653 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 SPON1Q9HCB6 807 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 ZNF214Q9UL59 606 aaPredicted RBP10.94□□□□□ -0.66
ZNF558-201ENST00000301475 FZD10Q9ULW2 581 aa10.94□□□□□ -0.66
ZNF558-201ENST00000301475 EVPLQ92817 2033 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 A8MU76 341 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 H0Y858 1186 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 ARPC2O15144 300 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 AXIN1O15169 862 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 MTHFD1P11586 935 aaKnown RBP10.93□□□□□ -0.66
ZNF558-201ENST00000301475 IL10P22301 178 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 SHMT2P34897 504 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 PLK1P53350 603 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 ADARB1P78563 741 aaKnown RBP10.93□□□□□ -0.66
ZNF558-201ENST00000301475 INPP5AQ14642 412 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 IER5Q5VY09 327 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 TBPL2Q6SJ96 375 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 CUZD1Q86UP6 607 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 PDPRQ8NCN5 879 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 CCDC138Q96M89 665 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 MRPL45Q9BRJ2 306 aaKnown RBP10.93□□□□□ -0.66
ZNF558-201ENST00000301475 TPK1Q9H3S4 243 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 FZD8Q9H461 694 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 SMARCAD1Q9H4L7 1026 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 SIAEQ9HAT2 523 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 TLR9Q9NR96 1032 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 NRBP2Q9NSY0 501 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 CMTM6Q9NX76 183 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 UBP1Q9NZI7 540 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 PKD2L2Q9NZM6 624 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 VWA7Q9Y334 891 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 MTF2Q9Y483 593 aaPredicted RBP10.93□□□□□ -0.66
ZNF558-201ENST00000301475 MYLKQ15746 1914 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 TTC24A2A3L6 582 aaPredicted RBP10.93□□□□□ -0.66
ZNF558-201ENST00000301475 CCDC162PA2VCL2 907 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 CLDN25C9JDP6 229 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 ZBTB24O43167 697 aaPredicted RBP10.93□□□□□ -0.66
ZNF558-201ENST00000301475 GPC4O75487 556 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 C7P10643 843 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 CYP2C9P11712 490 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 JUNBP17275 347 aaPredicted RBP10.93□□□□□ -0.66
ZNF558-201ENST00000301475 CYP2B6P20813 491 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 ATICP31939 592 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 RFC2P35250 354 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 HADHAP40939 763 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 ARCN1P48444 511 aaKnown RBP10.93□□□□□ -0.66
ZNF558-201ENST00000301475 STAT5BP51692 787 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 RAB10P61026 200 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 CTBP1Q13363 440 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 CLEC6AQ6EIG7 209 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 THOC7Q6I9Y2 204 aaKnown RBP10.93□□□□□ -0.66
ZNF558-201ENST00000301475 NEPROQ6NW34 567 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 HEXDCQ8WVB3 486 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 GMLQ99445 158 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 GBA3Q9H227 469 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 SEPT3Q9UH03 358 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 ZBTB42B2RXF5 422 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 NR5A2O00482 541 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 FARP2O94887 1054 aaPredicted RBP10.93□□□□□ -0.66
ZNF558-201ENST00000301475 LCP1P13796 627 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 GFAPP14136 432 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 CAPN3P20807 821 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 PLA2G16P53816 162 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 UGT3A2Q3SY77 523 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 OTUD1Q5VV17 481 aaPredicted RBP10.93□□□□□ -0.66
ZNF558-201ENST00000301475 DSG4Q86SJ6 1040 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 NAT16Q8N8M0 369 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 TRPV3Q8NET8 790 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 PNPT1Q8TCS8 783 aaKnown RBP10.93□□□□□ -0.66
ZNF558-201ENST00000301475 TRAPPC12Q8WVT3 735 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 FKBP10Q96AY3 582 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 C3orf30Q96M34 536 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 MUS81Q96NY9 551 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 HGH1Q9BTY7 390 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 BEGAINQ9BUH8 593 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 RHOBTB2Q9BYZ6 727 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 PCDH12Q9NPG4 1184 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 SETD4Q9NVD3 440 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 HACD3Q9P035 362 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 POU2F3Q9UKI9 436 aa10.93□□□□□ -0.66
ZNF558-201ENST00000301475 SYNJ2BP-COX16A0A087WUM0 186 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 FAM95CA0A1B0GW59 222 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 TSPAN8P19075 237 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 GPX3P22352 226 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 ATP5F1P24539 256 aaPredicted RBP10.92□□□□□ -0.66
ZNF558-201ENST00000301475 SOX11P35716 441 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 RAD23AP54725 363 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 DNASE1L3Q13609 305 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 SLC10A6Q3KNW5 377 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 SLC16A12Q6ZSM3 486 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 ZNF280CQ8ND82 737 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 AFG1LQ8WV93 481 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 NDRG1Q92597 394 aaKnown RBP10.92□□□□□ -0.66
ZNF558-201ENST00000301475 ROPN1LQ96C74 230 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 KLHL25Q9H0H3 589 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 AKIP1Q9NQ31 210 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 COX16Q9P0S2 106 aa10.92□□□□□ -0.66
ZNF558-201ENST00000301475 ACTR3BQ9P1U1 418 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms