RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 KIAA0907Q7Z7F0 614 aaPredicted RBP15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 PCDH20Q8N6Y1 951 aaKnown RBP15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 PAF1Q8N7H5 531 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 NAT16Q8N8M0 369 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 DNAJC1Q96KC8 554 aaKnown RBP15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 LRRC3BQ96PB8 259 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 APOL5Q9BWW9 433 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 TNKS2Q9H2K2 1166 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 C12orf65Q9H3J6 166 aaKnown RBP15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 NLE1Q9NVX2 485 aaPredicted RBP15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 THG1LQ9NWX6 298 aaKnown RBP15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 SLC39A10Q9ULF5 831 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 SPO11Q9Y5K1 396 aa15.78■□□□□ 0.12
HERPUD1-201ENST00000300302 HOXC11O43248 304 aaPredicted RBP15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 ZNF821O75541 412 aaPredicted RBP15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 GSRP00390 522 aa15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 CYP17A1P05093 508 aa15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 GSTA1P08263 222 aa15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 HOXB8P17481 243 aaPredicted RBP15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 TAC1P20366 129 aa15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 LPOP22079 712 aaPredicted RBP15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 GABRB3P28472 473 aa15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 SERPINA4P29622 427 aa15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 FOXN2P32314 431 aa15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 LEPRP48357 1165 aaKnown RBP15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 ARSDP51689 593 aa15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 ZNF140P52738 457 aaPredicted RBP15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 TMPRSS15P98073 1019 aa15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 HYAL1Q12794 435 aa15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 TCEAL5Q5H9L2 206 aa15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 MBLAC2Q68D91 279 aa15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 MRNIPQ6NTE8 343 aa15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 ADIPOR2Q86V24 386 aa15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 CAMK1DQ8IU85 385 aa15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 CILP2Q8IUL8 1156 aa15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 MDGA1Q8NFP4 955 aa15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 OR6K2Q8NGY2 324 aa15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 RSPRY1Q96DX4 576 aa15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 TBATAQ96M53 351 aa15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 TUBGCP5Q96RT8 1024 aa15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 TRPV4Q9HBA0 871 aa15.77■□□□□ 0.11
HERPUD1-201ENST00000300302 MYOFQ9NZM1 2061 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 CEP290O15078 2479 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 HTRA2O43464 458 aaPredicted RBP15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 BUD23O43709 281 aaKnown RBP15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 F7P08709 466 aaPredicted RBP15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 NEFHP12036 1026 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 SLC8A1P32418 973 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 NNMTP40261 264 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 ABL2P42684 1182 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 ABCG1P45844 678 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 SERPINB4P48594 390 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 DGKGP49619 791 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 RAD51Q06609 339 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 USP10Q14694 798 aaKnown RBP15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 TAF1BQ53T94 588 aaPredicted RBP15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 CMC1Q7Z7K0 106 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 OR13C4Q8NGS5 318 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 GPR150Q8NGU9 434 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 ZNF576Q9H609 170 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 MAGEE1Q9HCI5 957 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 FBXO10Q9UK96 956 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 TLK1Q9UKI8 766 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 SLC8A2Q9UPR5 921 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 A0A096LPK6 155 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 FAM95CA0A1B0GW59 222 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 WDR91A4D1P6 747 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 EBAG9O00559 213 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 CCL22O00626 93 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 TRAFD1O14545 582 aaPredicted RBP15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 AURKAO14965 403 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 CD3EAPO15446 510 aaKnown RBP15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 GOT2P00505 430 aaKnown RBP15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 PSMA3P25788 255 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 SLC12A2P55011 1212 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 MYLK3Q32MK0 819 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 TRIM68Q6AZZ1 485 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 RAPH1Q70E73 1250 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 SDCCAG8Q86SQ7 713 aaPredicted RBP15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 LCA5Q86VQ0 697 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 TRIM42Q8IWZ5 723 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 ARMC2Q8NEN0 867 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 OR4K2Q8NGD2 314 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 OR4L1Q8NH43 312 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 WFIKKN2Q8TEU8 576 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 ZNF75CPQ92670 426 aaPredicted RBP15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 E2F7Q96AV8 911 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 CDKN2AIPNLQ96HQ2 116 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 PITPNM3Q9BZ71 974 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 CAB39LQ9H9S4 337 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 CATSPERZQ9NTU4 200 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 FGFR1OP2Q9NVK5 253 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 ANKRD6Q9Y2G4 727 aa15.76■□□□□ 0.11
HERPUD1-201ENST00000300302 CCDC162PA2VCL2 907 aa15.75■□□□□ 0.11
HERPUD1-201ENST00000300302 HEPACAM2A8MVW5 462 aa15.75■□□□□ 0.11
HERPUD1-201ENST00000300302 LINC01565O15544 149 aa15.75■□□□□ 0.11
HERPUD1-201ENST00000300302 HAUS5O94927 633 aa15.75■□□□□ 0.11
HERPUD1-201ENST00000300302 PIGNO95427 931 aa15.75■□□□□ 0.11
HERPUD1-201ENST00000300302 POP4O95707 220 aaKnown RBP15.75■□□□□ 0.11
HERPUD1-201ENST00000300302 C2P06681 752 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms