RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 DMPKQ09013 629 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 BROXQ5VW32 411 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 ESRP1Q6NXG1 681 aaKnown RBP10.31□□□□□ -0.76
LMX1A-201ENST00000294816 ABHD11Q8NFV4 315 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 MAELQ96JY0 434 aaKnown RBP10.31□□□□□ -0.76
LMX1A-201ENST00000294816 RNF145Q96MT1 663 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 MRPL57Q9BQC6 102 aaKnown RBP10.31□□□□□ -0.76
LMX1A-201ENST00000294816 SEZ6LQ9BYH1 1024 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 NANOGQ9H9S0 305 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 LRRC4Q9HBW1 653 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 ZNF277Q9NRM2 450 aaPredicted RBP10.31□□□□□ -0.76
LMX1A-201ENST00000294816 ZNF214Q9UL59 606 aaPredicted RBP10.31□□□□□ -0.76
LMX1A-201ENST00000294816 GIT1Q9Y2X7 761 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 CPQQ9Y646 472 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 USP3Q9Y6I4 520 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 TRIM64CA6NLI5 447 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 CLDN25C9JDP6 229 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 XYLBO75191 536 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 RASAL1O95294 804 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 PCNAP12004 261 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 CD151P48509 253 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 NPY2RP49146 381 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 TPTEP56180 551 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 YBX1P67809 324 aaKnown RBP10.31□□□□□ -0.76
LMX1A-201ENST00000294816 INCA1Q0VD86 236 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 CYBRD1Q53TN4 286 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 FAM45BPQ6NSW5 357 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 CRTC3Q6UUV7 619 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 SPATA22Q8NHS9 363 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 SLC7A14Q8TBB6 771 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 FAM45AQ8TCE6 357 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 ADAMTS16Q8TE57 1224 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 C17orf50Q8WW18 174 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 FAR2Q96K12 515 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 DOK1Q99704 481 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 NDEL1Q9GZM8 345 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 ADAMTS10Q9H324 1103 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 SMARCAD1Q9H4L7 1026 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 TMEM9Q9P0T7 183 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.31□□□□□ -0.76
LMX1A-201ENST00000294816 TNFSF13BQ9Y275 285 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 SLC30A1Q9Y6M5 507 aa10.31□□□□□ -0.76
LMX1A-201ENST00000294816 COL2A1P02458 1487 aaPredicted RBP10.3□□□□□ -0.76
LMX1A-201ENST00000294816 A0A087WZ62 844 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 FAM72CH0Y354 149 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 HPCAL1P37235 193 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 PSMD8P48556 350 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 HLCSP50747 726 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 CCT8P50990 548 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 KPNA2P52292 529 aaKnown RBP10.3□□□□□ -0.76
LMX1A-201ENST00000294816 ADIGQ0VDE8 80 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 SPCS2Q15005 226 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 UGP2Q16851 508 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 HABP4Q5JVS0 413 aaKnown RBP10.3□□□□□ -0.76
LMX1A-201ENST00000294816 FAM72AQ5TYM5 149 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 FAM72DQ6L9T8 149 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 ZNF773Q6PK81 442 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 PDZD4Q76G19 769 aaPredicted RBP10.3□□□□□ -0.76
LMX1A-201ENST00000294816 FAM72BQ86X60 149 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 MFSD6LQ8IWD5 586 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 ADGRG5Q8IZF4 528 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 CADM3Q8N126 398 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 STARD8Q92502 1023 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 ALPK1Q96QP1 1244 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 FDXACB1Q9BRP7 624 aaPredicted RBP10.3□□□□□ -0.76
LMX1A-201ENST00000294816 PALMDQ9NP74 551 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 CD320Q9NPF0 282 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 SLC2A6Q9UGQ3 507 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 AKT3Q9Y243 479 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 ATP11BQ9Y2G3 1177 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 SNX10Q9Y5X0 201 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 AQP12BA6NM10 295 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 A8MT66 165 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 ZNF487B1APH4 448 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 PTGES3LE9PB15 166 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 PABPC1P11940 636 aaKnown RBP10.3□□□□□ -0.76
LMX1A-201ENST00000294816 CYP2B6P20813 491 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 BDNFP23560 247 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 MBTD1Q05BQ5 628 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 CDH17Q12864 832 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 ZNF846Q147U1 533 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 KCNJ8Q15842 424 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 RABL3Q5HYI8 236 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 RBM20Q5T481 1227 aaKnown RBP10.3□□□□□ -0.76
LMX1A-201ENST00000294816 PRAMEF18Q5VWM3 479 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 FUNDC1Q8IVP5 155 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 AQP12AQ8IXF9 295 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 TRPV3Q8NET8 790 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 OR13F1Q8NGS4 319 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 RAB2BQ8WUD1 216 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 FAM167AQ96KS9 214 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 C3orf30Q96M34 536 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 FZD8Q9H461 694 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 HMG20AQ9NP66 347 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 CMTM6Q9NX76 183 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 NSMCE4AQ9NXX6 385 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 ANAPC2Q9UJX6 822 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 POU2F3Q9UKI9 436 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 NDUFAF1Q9Y375 327 aa10.3□□□□□ -0.76
LMX1A-201ENST00000294816 MAGEB16A2A368 324 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms