RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 HIC2Q96JB3 615 aa25.37■■□□□ 1.65
U2AF1-201ENST00000291552 CSPG4P5Q96PW8 444 aa25.37■■□□□ 1.65
U2AF1-201ENST00000291552 MRPL47Q9HD33 250 aaKnown RBP25.37■■□□□ 1.65
U2AF1-201ENST00000291552 ASCL3Q9NQ33 180 aa25.37■■□□□ 1.65
U2AF1-201ENST00000291552 KALRNO60229 2985 aa25.37■■□□□ 1.65
U2AF1-201ENST00000291552 TMEM110-MUSTN1A8MSY1 372 aa25.36■■□□□ 1.65
U2AF1-201ENST00000291552 H3BRJ5 948 aa25.36■■□□□ 1.65
U2AF1-201ENST00000291552 RRP8O43159 456 aaKnown RBP25.36■■□□□ 1.65
U2AF1-201ENST00000291552 RECQL5O94762 991 aaPredicted RBP25.36■■□□□ 1.65
U2AF1-201ENST00000291552 LSSP48449 732 aa25.36■■□□□ 1.65
U2AF1-201ENST00000291552 SCNN1BP51168 640 aa25.36■■□□□ 1.65
U2AF1-201ENST00000291552 PDX1P52945 283 aa25.36■■□□□ 1.65
U2AF1-201ENST00000291552 AP1S1P61966 158 aa25.36■■□□□ 1.65
U2AF1-201ENST00000291552 FANCCQ00597 558 aa25.36■■□□□ 1.65
U2AF1-201ENST00000291552 BCL2L1Q07817 233 aa25.36■■□□□ 1.65
U2AF1-201ENST00000291552 TDRD12Q587J7 1177 aaKnown RBP25.36■■□□□ 1.65
U2AF1-201ENST00000291552 ENPP7Q6UWV6 458 aa25.36■■□□□ 1.65
U2AF1-201ENST00000291552 PGBD5Q8N414 524 aa25.36■■□□□ 1.65
U2AF1-201ENST00000291552 LZTR1Q8N653 840 aa25.36■■□□□ 1.65
U2AF1-201ENST00000291552 HSPH1Q92598 858 aa25.36■■□□□ 1.65
U2AF1-201ENST00000291552 FUBP1Q96AE4 644 aaKnown RBP25.36■■□□□ 1.65
U2AF1-201ENST00000291552 BTBD6Q96KE9 485 aa25.36■■□□□ 1.65
U2AF1-201ENST00000291552 THAP2Q9H0W7 228 aa25.36■■□□□ 1.65
U2AF1-201ENST00000291552 ZWILCHQ9H900 591 aa25.36■■□□□ 1.65
U2AF1-201ENST00000291552 POLR1BQ9H9Y6 1135 aa25.36■■□□□ 1.65
U2AF1-201ENST00000291552 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.36■■□□□ 1.65
U2AF1-201ENST00000291552 SEPT3Q9UH03 358 aa25.36■■□□□ 1.65
U2AF1-201ENST00000291552 ENTPD2Q9Y5L3 495 aa25.36■■□□□ 1.65
U2AF1-201ENST00000291552 SCN8AQ9UQD0 1980 aa25.35■■□□□ 1.65
U2AF1-201ENST00000291552 A0A1W2PQJ5 194 aa25.35■■□□□ 1.65
U2AF1-201ENST00000291552 SYCE3A1L190 88 aa25.35■■□□□ 1.65
U2AF1-201ENST00000291552 PMS2P1A4D2B8 440 aa25.35■■□□□ 1.65
U2AF1-201ENST00000291552 CFAP69A5D8W1 941 aa25.35■■□□□ 1.65
U2AF1-201ENST00000291552 RASGRP1O95267 797 aa25.35■■□□□ 1.65
U2AF1-201ENST00000291552 RARAP10276 462 aa25.35■■□□□ 1.65
U2AF1-201ENST00000291552 CR2P20023 1033 aa25.35■■□□□ 1.65
U2AF1-201ENST00000291552 SRP54P61011 504 aaKnown RBP25.35■■□□□ 1.65
U2AF1-201ENST00000291552 SLC25A11Q02978 314 aaKnown RBP25.35■■□□□ 1.65
U2AF1-201ENST00000291552 TLE3Q04726 772 aa25.35■■□□□ 1.65
U2AF1-201ENST00000291552 SPACA3Q8IXA5 215 aa25.35■■□□□ 1.65
U2AF1-201ENST00000291552 OR1E3Q8WZA6 343 aa25.35■■□□□ 1.65
U2AF1-201ENST00000291552 ATXN7L3BQ96GX2 97 aa25.35■■□□□ 1.65
U2AF1-201ENST00000291552 WDR92Q96MX6 357 aa25.35■■□□□ 1.65
U2AF1-201ENST00000291552 ZNF599Q96NL3 588 aa25.35■■□□□ 1.65
U2AF1-201ENST00000291552 PCDH18Q9HCL0 1135 aa25.35■■□□□ 1.65
U2AF1-201ENST00000291552 B4GALT6Q9UBX8 382 aa25.35■■□□□ 1.65
U2AF1-201ENST00000291552 KLQ9UEF7 1012 aa25.35■■□□□ 1.65
U2AF1-201ENST00000291552 RABGEF1Q9UJ41 708 aa25.35■■□□□ 1.65
U2AF1-201ENST00000291552 PADI4Q9UM07 663 aa25.35■■□□□ 1.65
U2AF1-201ENST00000291552 ELFN1P0C7U0 828 aa25.34■■□□□ 1.65
U2AF1-201ENST00000291552 RPIAP49247 311 aa25.34■■□□□ 1.65
U2AF1-201ENST00000291552 BLKP51451 505 aa25.34■■□□□ 1.65
U2AF1-201ENST00000291552 KIAA1024LP59773 190 aa25.34■■□□□ 1.65
U2AF1-201ENST00000291552 ACAP1Q15027 740 aa25.34■■□□□ 1.65
U2AF1-201ENST00000291552 RBM44Q6ZP01 1051 aaKnown RBP25.34■■□□□ 1.65
U2AF1-201ENST00000291552 RD3Q7Z3Z2 195 aa25.34■■□□□ 1.65
U2AF1-201ENST00000291552 NIPA2Q8N8Q9 360 aa25.34■■□□□ 1.65
U2AF1-201ENST00000291552 SPOCK2Q92563 424 aa25.34■■□□□ 1.65
U2AF1-201ENST00000291552 GLMNQ92990 594 aa25.34■■□□□ 1.65
U2AF1-201ENST00000291552 NAT6Q93015 286 aa25.34■■□□□ 1.65
U2AF1-201ENST00000291552 ZNF578Q96N58 590 aaPredicted RBP25.34■■□□□ 1.65
U2AF1-201ENST00000291552 CCDC3Q9BQI4 270 aa25.34■■□□□ 1.65
U2AF1-201ENST00000291552 FGF22Q9HCT0 170 aa25.34■■□□□ 1.65
U2AF1-201ENST00000291552 SIRPGQ9P1W8 387 aa25.34■■□□□ 1.65
U2AF1-201ENST00000291552 SATB2Q9UPW6 733 aa25.34■■□□□ 1.65
U2AF1-201ENST00000291552 ATMQ13315 3056 aa25.33■■□□□ 1.65
U2AF1-201ENST00000291552 TMEM202A6NGA9 273 aa25.33■■□□□ 1.65
U2AF1-201ENST00000291552 A8MX80 341 aa25.33■■□□□ 1.65
U2AF1-201ENST00000291552 HTRA2O43464 458 aaPredicted RBP25.33■■□□□ 1.65
U2AF1-201ENST00000291552 MAFKO60675 156 aa25.33■■□□□ 1.65
U2AF1-201ENST00000291552 HTR1BP28222 390 aa25.33■■□□□ 1.65
U2AF1-201ENST00000291552 ARL4AP40617 200 aa25.33■■□□□ 1.65
U2AF1-201ENST00000291552 ELOCQ15369 112 aa25.33■■□□□ 1.65
U2AF1-201ENST00000291552 BOLA3Q53S33 107 aa25.33■■□□□ 1.65
U2AF1-201ENST00000291552 C3orf38Q5JPI3 329 aa25.33■■□□□ 1.65
U2AF1-201ENST00000291552 TMCO3Q6UWJ1 677 aa25.33■■□□□ 1.65
U2AF1-201ENST00000291552 ARL10Q8N8L6 244 aa25.33■■□□□ 1.65
U2AF1-201ENST00000291552 TPCN2Q8NHX9 752 aa25.33■■□□□ 1.65
U2AF1-201ENST00000291552 SYN2Q92777 582 aaPredicted RBP25.33■■□□□ 1.65
U2AF1-201ENST00000291552 PRR11Q96HE9 360 aaPredicted RBP25.33■■□□□ 1.65
U2AF1-201ENST00000291552 GCN1Q92616 2671 aaKnown RBP25.33■■□□□ 1.65
U2AF1-201ENST00000291552 A0A087X0T9 212 aa25.32■■□□□ 1.64
U2AF1-201ENST00000291552 NTN3O00634 580 aaPredicted RBP25.32■■□□□ 1.64
U2AF1-201ENST00000291552 TCEA3O75764 348 aa25.32■■□□□ 1.64
U2AF1-201ENST00000291552 ALPIP09923 528 aa25.32■■□□□ 1.64
U2AF1-201ENST00000291552 FAM228BP0C875 321 aa25.32■■□□□ 1.64
U2AF1-201ENST00000291552 RENBPP51606 427 aa25.32■■□□□ 1.64
U2AF1-201ENST00000291552 PCBP4P57723 403 aaKnown RBP25.32■■□□□ 1.64
U2AF1-201ENST00000291552 ZNF235Q14590 738 aa25.32■■□□□ 1.64
U2AF1-201ENST00000291552 LVRNQ6Q4G3 990 aa25.32■■□□□ 1.64
U2AF1-201ENST00000291552 CPNE8Q86YQ8 564 aa25.32■■□□□ 1.64
U2AF1-201ENST00000291552 TEKT4Q8WW24 435 aa25.32■■□□□ 1.64
U2AF1-201ENST00000291552 NAF1Q96HR8 494 aaKnown RBP25.32■■□□□ 1.64
U2AF1-201ENST00000291552 COQ10AQ96MF6 247 aa25.32■■□□□ 1.64
U2AF1-201ENST00000291552 RBM15Q96T37 977 aaKnown RBP eCLIP25.32■■□□□ 1.64
U2AF1-201ENST00000291552 MGME1Q9BQP7 344 aa25.32■■□□□ 1.64
U2AF1-201ENST00000291552 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.32■■□□□ 1.64
U2AF1-201ENST00000291552 NUP85Q9BW27 656 aa25.32■■□□□ 1.64
U2AF1-201ENST00000291552 GULP1Q9UBP9 304 aa25.32■■□□□ 1.64
U2AF1-201ENST00000291552 ANAPC7Q9UJX3 599 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms