RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 ADGRE2Q9UHX3 823 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 MRPS7Q9Y2R9 242 aaKnown RBP15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 FADS3Q9Y5Q0 445 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 NCK1P16333 377 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 GJA8P48165 433 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 EPHB3P54753 998 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 RNASE12Q5GAN4 147 aaKnown RBP15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 PAGE2BQ5JRK9 111 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 FAM83AQ86UY5 434 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 RTL3Q8N8U3 475 aaKnown RBP15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 ELMO1Q92556 727 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 FAM163AQ96GL9 167 aaPredicted RBP15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 GLT1D1Q96MS3 346 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 TNFSF13BQ9Y275 285 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 PCDH8O95206 1070 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 ALDH2P05091 517 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 RPS6KA3P51812 740 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 KPNA1P52294 538 aaPredicted RBP15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 PRAMEF19Q5SWL8 479 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 ZNF410Q86VK4 478 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 OOSP2Q86WS3 158 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 MAGEB10Q96LZ2 347 aaPredicted RBP15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 CRISPLD1Q9H336 500 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 CHRAC1Q9NRG0 131 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 NR2E3Q9Y5X4 410 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 C2P06681 752 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 XIAPP98170 497 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 APTXQ7Z2E3 356 aaKnown RBP15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 ANKRD52Q8NB46 1076 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 NELL1Q92832 810 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 EBF4Q9BQW3 602 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 TIMMDC1Q9NPL8 285 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 TIMM22Q9Y584 194 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 N6AMT1Q9Y5N5 214 aa15.39■□□□□ 0.05
SHROOM4-201ENST00000289292 IFRD1O00458 451 aaPredicted RBP15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 MLYCDO95822 493 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 RABGGTBP53611 331 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 PIWIL4Q7Z3Z4 852 aaKnown RBP15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 PYROXD2Q8N2H3 581 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 GRIN3AQ8TCU5 1115 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 S100ZQ8WXG8 99 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 COX4I2Q96KJ9 171 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 LENG8Q96PV6 779 aaPredicted RBP15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 RPRD1BQ9NQG5 326 aaKnown RBP15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 MARCH2Q9P0N8 246 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 OR6B1O95007 311 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 ABATP80404 500 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 FSCN1Q16658 493 aaKnown RBP15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 VSTM1Q6UX27 236 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 KIAA0408Q6ZU52 694 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 RD3Q7Z3Z2 195 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 USP7Q93009 1102 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 OR52E6Q96RD3 313 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 TMEM216Q9P0N5 145 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 LGALS13Q9UHV8 139 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 RAB26Q9ULW5 256 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 TBC1D30Q9Y2I9 924 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 FGF10O15520 208 aaPredicted RBP15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 MAGEC1O60732 1142 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 SLC22A3O75751 556 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 SEMA3DO95025 777 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 C4BPAP04003 597 aaKnown RBP15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 CCNFP41002 786 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 CCNIQ14094 377 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 QPRTQ15274 297 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 ACSBG2Q5FVE4 666 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 DENND5AQ6IQ26 1287 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 DCBLD1Q8N8Z6 715 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 ZNF671Q8TAW3 534 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 MYDGFQ969H8 173 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 C18orf25Q96B23 403 aaPredicted RBP15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 TM6SF2Q9BZW4 377 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 BCLAF3A2AJT9 711 aaKnown RBP15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 ALDH1A2O94788 518 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 HPGDP15428 266 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 CDK20Q8IZL9 346 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 C7orf26Q96N11 449 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 ARHGAP28Q9P2N2 729 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 FBXO5Q9UKT4 447 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 TMCO1Q9UM00 188 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 STXBP5LQ9Y2K9 1186 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 FYNP06241 537 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 TAB1Q15750 504 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 TRIM74Q86UV6 250 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 TRIM73Q86UV7 250 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 PROSER1Q86XN7 944 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 NT5DC4Q86YG4 428 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 DENND1CQ8IV53 801 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 ADCY4Q8NFM4 1077 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 PPP1R14BQ96C90 147 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 PPM1MQ96MI6 270 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 KLHL28Q9NXS3 571 aa15.38■□□□□ 0.05
SHROOM4-201ENST00000289292 LRCH4O75427 683 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 ADAM17P78536 824 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 SLC15A2Q16348 729 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 CRTC3Q6UUV7 619 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 NKAPQ8N5F7 415 aaKnown RBP15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 C10orf82Q8WW14 230 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 CCL22O00626 93 aa15.37■□□□□ 0.05
SHROOM4-201ENST00000289292 MMP8P22894 467 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms