RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 ZNF609O15014 1411 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 SAGP10523 405 aaPredicted RBP8.76□□□□□ -1.01
NIPBL-201ENST00000282516 HSD3B1P14060 373 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 GJA1P17302 382 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 AKT2P31751 481 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 CPTPQ5TA50 214 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 ZNF613Q6PF04 617 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 RBM44Q6ZP01 1051 aaKnown RBP8.76□□□□□ -1.01
NIPBL-201ENST00000282516 CCDC86Q9H6F5 360 aaKnown RBP8.76□□□□□ -1.01
NIPBL-201ENST00000282516 C3orf14Q9HBI5 128 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 MAGEL2Q9UJ55 1249 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 NTRK1P04629 796 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 PSMA1P25786 263 aaKnown RBP8.76□□□□□ -1.01
NIPBL-201ENST00000282516 CLCN5P51795 746 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 TDRPQ86YL5 185 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 ZNF433Q8N7K0 673 aaPredicted RBP8.76□□□□□ -1.01
NIPBL-201ENST00000282516 GPR156Q8NFN8 814 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 PHB2Q99623 299 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 SNCAIPQ9Y6H5 919 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 CCNB2O95067 398 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 ZNF234Q14588 700 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 HLFQ16534 295 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 MOXD1Q6UVY6 613 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 RBM4BQ9BQ04 359 aaKnown RBP8.76□□□□□ -1.01
NIPBL-201ENST00000282516 RBM4Q9BWF3 364 aaKnown RBP8.76□□□□□ -1.01
NIPBL-201ENST00000282516 FAM205CA6NFA0 338 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 OR2AT4A6NND4 320 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 DBIP07108 87 aaKnown RBP8.76□□□□□ -1.01
NIPBL-201ENST00000282516 MFSD10Q14728 455 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 SLC9A4Q6AI14 798 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 NSUN4Q96CB9 384 aaKnown RBP8.76□□□□□ -1.01
NIPBL-201ENST00000282516 MTRRQ9UBK8 725 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 SLC27A6Q9Y2P4 619 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 PNPLA6Q8IY17 1366 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 M0R036 132 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 PGRP06401 933 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 E2F2Q14209 437 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 VPS26BQ4G0F5 336 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 ATXN7L2Q5T6C5 722 aaPredicted RBP8.76□□□□□ -1.01
NIPBL-201ENST00000282516 OGFRL1Q5TC84 451 aaPredicted RBP8.76□□□□□ -1.01
NIPBL-201ENST00000282516 ZNF471Q9BX82 626 aaPredicted RBP8.76□□□□□ -1.01
NIPBL-201ENST00000282516 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.76□□□□□ -1.01
NIPBL-201ENST00000282516 MAN2B2Q9Y2E5 1009 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 TELO2Q9Y4R8 837 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 MAGI2Q86UL8 1455 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 LRRC7Q96NW7 1537 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 TRIM38O00635 465 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 ABLIM1O14639 778 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 DCLK1O15075 740 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 SRSF11Q05519 484 aaKnown RBP8.76□□□□□ -1.01
NIPBL-201ENST00000282516 ADNP2Q6IQ32 1131 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 IPCEF1Q8WWN9 437 aaPredicted RBP8.76□□□□□ -1.01
NIPBL-201ENST00000282516 L2HGDHQ9H9P8 463 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 MKLN1Q9UL63 735 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 CORO1CQ9ULV4 474 aaPredicted RBP8.76□□□□□ -1.01
NIPBL-201ENST00000282516 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 TTC34A8MYJ7 566 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 SLC30A4O14863 429 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 FADS2O95864 444 aaKnown RBP8.76□□□□□ -1.01
NIPBL-201ENST00000282516 NPTX2P47972 431 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 PRKG2Q13237 762 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 TUBA3CQ13748 450 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 SLC25A25Q6KCM7 469 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 ANKRD26P1Q6NSI1 321 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 CRELD2Q6UXH1 353 aaPredicted RBP8.76□□□□□ -1.01
NIPBL-201ENST00000282516 SPERTQ8NA61 448 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 TMIEQ8NEW7 156 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 LRMDAQ9H2I8 198 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 MOV10Q9HCE1 1003 aaKnown RBP8.76□□□□□ -1.01
NIPBL-201ENST00000282516 PAK6Q9NQU5 681 aaPredicted RBP8.76□□□□□ -1.01
NIPBL-201ENST00000282516 PREX2Q70Z35 1606 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 GLI2P10070 1586 aa8.76□□□□□ -1.01
NIPBL-201ENST00000282516 BBIP1A8MTZ0 92 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 PDE2AO00408 941 aaPredicted RBP8.75□□□□□ -1.01
NIPBL-201ENST00000282516 PITPNM1O00562 1244 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 POMCP01189 267 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 IFNA7P01567 189 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 OR8H1Q8NGG4 311 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 HTRA1Q92743 480 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 KLHL5Q96PQ7 755 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 AIF1LQ9BQI0 150 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 KIAA1683Q9H0B3 1180 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 PCDH12Q9NPG4 1184 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 TRNAU1APQ9NX07 287 aaKnown RBP8.75□□□□□ -1.01
NIPBL-201ENST00000282516 PCDHA11Q9Y5I1 949 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 RPTORQ8N122 1335 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 H0YJX3 145 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 PDCD5O14737 125 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 NKRFO15226 690 aaKnown RBP eCLIP8.75□□□□□ -1.013e-8■■■■■ 27.5
NIPBL-201ENST00000282516 ZNF697Q5TEC3 545 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 RAET1GQ6H3X3 334 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 TRMT2AQ8IZ69 625 aaKnown RBP8.75□□□□□ -1.01
NIPBL-201ENST00000282516 OR8H3Q8N146 312 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 MTFMTQ96DP5 389 aaKnown RBP8.75□□□□□ -1.01
NIPBL-201ENST00000282516 TRAV19A0A0A6YYK7 116 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 SRCP12931 536 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 RPS12P25398 132 aaKnown RBP8.75□□□□□ -1.01
NIPBL-201ENST00000282516 ALKBH2Q6NS38 261 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 TUBA3EQ6PEY2 450 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 CRTC3Q6UUV7 619 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms