RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 LRMDAQ9H2I8 198 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 NLE1Q9NVX2 485 aaPredicted RBP16.69■□□□□ 0.26
CCDC40-201ENST00000269318 HAO1Q9UJM8 370 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 ZNF510Q9Y2H8 683 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 PCDHGC4Q9Y5F7 938 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 TRAV19A0A0A6YYK7 116 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 TMEM114B3SHH9 223 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 H2AFYO75367 372 aaKnown RBP16.69■□□□□ 0.26
CCDC40-201ENST00000269318 WISP3O95389 354 aaPredicted RBP16.69■□□□□ 0.26
CCDC40-201ENST00000269318 CRTAMO95727 393 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 GLUD1P00367 558 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 PFKLP17858 780 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 SLC12A2P55011 1212 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 ZBTB16Q05516 673 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 TRAF2Q12933 501 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 TSNAXIP1Q2TAA8 658 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 TTC31Q49AM3 519 aaPredicted RBP16.69■□□□□ 0.26
CCDC40-201ENST00000269318 HECTD2Q5U5R9 776 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 CYB5D1Q6P9G0 228 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 TTC7BQ86TV6 843 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 WDR75Q8IWA0 830 aaKnown RBP16.69■□□□□ 0.26
CCDC40-201ENST00000269318 ELMOD1Q8N336 334 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 MRPL43Q8N983 215 aaKnown RBP16.69■□□□□ 0.26
CCDC40-201ENST00000269318 TDRD5Q8NAT2 981 aaKnown RBP16.69■□□□□ 0.26
CCDC40-201ENST00000269318 PPP4R1Q8TF05 950 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 SLC7A6OSQ96CW6 309 aaPredicted RBP16.69■□□□□ 0.26
CCDC40-201ENST00000269318 CORO1BQ9BR76 489 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 GATA5Q9BWX5 397 aaPredicted RBP16.69■□□□□ 0.26
CCDC40-201ENST00000269318 SLC46A2Q9BY10 475 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 NMUR2Q9GZQ4 415 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 IGSF5Q9NSI5 407 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 XPR1Q9UBH6 696 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 SH3BP1Q9Y3L3 701 aa16.69■□□□□ 0.26
CCDC40-201ENST00000269318 FCHO1O14526 889 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 TRAFD1O14545 582 aaPredicted RBP16.68■□□□□ 0.26
CCDC40-201ENST00000269318 CD3EAPO15446 510 aaKnown RBP16.68■□□□□ 0.26
CCDC40-201ENST00000269318 GLP2RO95838 553 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 MYL4P12829 197 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 ALOX15P16050 662 aaPredicted RBP16.68■□□□□ 0.26
CCDC40-201ENST00000269318 BMPR1AP36894 532 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 CCR2P41597 374 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 ELF3P78545 371 aaPredicted RBP16.68■□□□□ 0.26
CCDC40-201ENST00000269318 SEMA3AQ14563 771 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 TAF1AQ15573 450 aaPredicted RBP16.68■□□□□ 0.26
CCDC40-201ENST00000269318 MPP7Q5T2T1 576 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 LIPMQ5VYY2 423 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 MAVSQ7Z434 540 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 MFN1Q8IWA4 741 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 SPATA6LQ8N4H0 392 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 MDGA1Q8NFP4 955 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 BHMTQ93088 406 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 RMDN1Q96DB5 314 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 CDKN2AIPNLQ96HQ2 116 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 SMIM14Q96QK8 99 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 EBF4Q9BQW3 602 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 ASAH2Q9NR71 780 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 PNPOQ9NVS9 261 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 VWA7Q9Y334 891 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 LEFTY2O00292 366 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 ZNF195O14628 629 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 CCL16O15467 120 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 MT-CO1P00395 513 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 ATP5BP06576 529 aaKnown RBP16.68■□□□□ 0.26
CCDC40-201ENST00000269318 CLCN4P51793 760 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 TUBB3Q13509 450 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 KRT72Q14CN4 511 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 PLPP4Q5VZY2 271 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 APCDD1Q8J025 514 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 TTC16Q8NEE8 873 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 LPCAT1Q8NF37 534 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 OR4L1Q8NH43 312 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 DDI1Q8WTU0 396 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 HEXDCQ8WVB3 486 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 SREK1Q8WXA9 508 aaKnown RBP16.68■□□□□ 0.26
CCDC40-201ENST00000269318 INPP5DQ92835 1189 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 PTCD3Q96EY7 689 aaKnown RBP16.68■□□□□ 0.26
CCDC40-201ENST00000269318 TSPAN17Q96FV3 270 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 SCYL1Q96KG9 808 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 UBXN10Q96LJ8 280 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 TMEM237Q96Q45 408 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 GCNAQ96QF7 691 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 STN1Q9H668 368 aaKnown RBP16.68■□□□□ 0.26
CCDC40-201ENST00000269318 HCFC1R1Q9NWW0 138 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 LNPEPQ9UIQ6 1025 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 CLEC4EQ9ULY5 219 aa16.68■□□□□ 0.26
CCDC40-201ENST00000269318 FCF1Q9Y324 198 aaKnown RBP16.68■□□□□ 0.26
CCDC40-201ENST00000269318 ANKRD66B4E2M5 251 aa16.67■□□□□ 0.26
CCDC40-201ENST00000269318 FZD6O60353 706 aa16.67■□□□□ 0.26
CCDC40-201ENST00000269318 KRT16P08779 473 aa16.67■□□□□ 0.26
CCDC40-201ENST00000269318 OGNP20774 298 aaKnown RBP16.67■□□□□ 0.26
CCDC40-201ENST00000269318 CTNNB1P35222 781 aa16.67■□□□□ 0.26
CCDC40-201ENST00000269318 PRKAA2P54646 552 aa16.67■□□□□ 0.26
CCDC40-201ENST00000269318 EPHA5P54756 1037 aa16.67■□□□□ 0.26
CCDC40-201ENST00000269318 CDKN2DP55273 166 aa16.67■□□□□ 0.26
CCDC40-201ENST00000269318 ILF2Q12905 390 aaKnown RBP16.67■□□□□ 0.26
CCDC40-201ENST00000269318 TYSND1Q2T9J0 566 aa16.67■□□□□ 0.26
CCDC40-201ENST00000269318 MPPE1Q53F39 396 aa16.67■□□□□ 0.26
CCDC40-201ENST00000269318 MRNIPQ6NTE8 343 aa16.67■□□□□ 0.26
CCDC40-201ENST00000269318 PSRC1Q6PGN9 363 aaPredicted RBP16.67■□□□□ 0.26
CCDC40-201ENST00000269318 GLT6D1Q7Z4J2 308 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms