RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 GORASP1Q9BQQ3 440 aa18.06■□□□□ 0.48
COL5A3-201ENST00000264828 MANSC4A6NHS7 340 aaPredicted RBP18.06■□□□□ 0.48
COL5A3-201ENST00000264828 PRKAR1AP10644 381 aa18.06■□□□□ 0.48
COL5A3-201ENST00000264828 GABRB2P47870 512 aa18.06■□□□□ 0.48
COL5A3-201ENST00000264828 ACLYP53396 1101 aa18.06■□□□□ 0.48
COL5A3-201ENST00000264828 TRAP1Q12931 704 aaKnown RBP18.06■□□□□ 0.48
COL5A3-201ENST00000264828 MADCAM1Q13477 382 aa18.06■□□□□ 0.48
COL5A3-201ENST00000264828 C1orf186Q6ZWK4 172 aa18.06■□□□□ 0.48
COL5A3-201ENST00000264828 AADATQ8N5Z0 425 aa18.06■□□□□ 0.48
COL5A3-201ENST00000264828 TEX47Q8TBZ9 253 aa18.06■□□□□ 0.48
COL5A3-201ENST00000264828 P2RX7Q99572 595 aaKnown RBP18.06■□□□□ 0.48
COL5A3-201ENST00000264828 ARL8BQ9NVJ2 186 aa18.06■□□□□ 0.48
COL5A3-201ENST00000264828 TBC1D30Q9Y2I9 924 aa18.06■□□□□ 0.48
COL5A3-201ENST00000264828 OR10H2O60403 315 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 CDH3P22223 829 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 OAZ1P54368 228 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 FAM131AQ6UXB0 335 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 PIH1D2Q8WWB5 315 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 S100ZQ8WXG8 99 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 RAD51AP1Q96B01 352 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 PRR5-ARHGAP8B1AHC4 643 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 ARHGAP8P85298 464 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 OR52E6Q96RD3 313 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 AGXT2Q9BYV1 514 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 hCG_1818297A0A087WSY0 165 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 AP3D1O14617 1153 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 KPNA5O15131 536 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 FMO1Q01740 532 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 APOBEC3HQ6NTF7 200 aaKnown RBP18.05■□□□□ 0.48
COL5A3-201ENST00000264828 CRELD2Q6UXH1 353 aaPredicted RBP18.05■□□□□ 0.48
COL5A3-201ENST00000264828 CORO2BQ9UQ03 480 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 UMODL1Q5DID0 1318 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 ATP5C1P36542 298 aaKnown RBP18.05■□□□□ 0.48
COL5A3-201ENST00000264828 TAS2R40P59535 323 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 CPSF6Q16630 551 aaKnown RBP eCLIP18.05■□□□□ 0.48
COL5A3-201ENST00000264828 DUPD1Q68J44 220 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 CXXC5Q7LFL8 322 aaKnown RBP18.05■□□□□ 0.48
COL5A3-201ENST00000264828 SLCO6A1Q86UG4 719 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 HTRA1Q92743 480 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 LINGO1Q96FE5 620 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 MTMR9Q96QG7 549 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 LRRC19Q9H756 370 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 NOL11Q9H8H0 719 aaKnown RBP18.05■□□□□ 0.48
COL5A3-201ENST00000264828 OR10H1Q9Y4A9 318 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 DDR1Q08345 913 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 TCEAL5Q5H9L2 206 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 NIPA1Q7RTP0 329 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 ADAM2Q99965 735 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 PORCNQ9H237 461 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 AK5Q9Y6K8 562 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 DGKBQ9Y6T7 804 aa18.05■□□□□ 0.48
COL5A3-201ENST00000264828 H0Y858 1186 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 HDAC3O15379 428 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 RPLP2P05387 115 aaKnown RBP18.04■□□□□ 0.48
COL5A3-201ENST00000264828 CTSEP14091 401 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 SLC7A2P52569 658 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 CMC1Q7Z7K0 106 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 TMEM86AQ8N2M4 240 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 SEMA3CQ99985 751 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 FAIM2Q9BWQ8 316 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 RFXANKO14593 260 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 SLC28A2O43868 658 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 NADKO95544 446 aaPredicted RBP18.04■□□□□ 0.48
COL5A3-201ENST00000264828 TTPAP49638 278 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 CLHC1Q8NHS4 586 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 EBNA1BP2Q99848 306 aaKnown RBP18.04■□□□□ 0.48
COL5A3-201ENST00000264828 PRKAB1Q9Y478 270 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 ADGRB2O60241 1585 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 CXCL11O14625 94 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 GPR1P46091 355 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 AKAP14Q86UN6 197 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 ZFP28Q8NHY6 868 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 SUSD6Q92537 303 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 ITCHQ96J02 903 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 COX4I2Q96KJ9 171 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 DMTF1Q9Y222 760 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 CLDN5O00501 218 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 AZIN1O14977 448 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 PRKCIP41743 596 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 RPL7AP62424 266 aaKnown RBP18.04■□□□□ 0.48
COL5A3-201ENST00000264828 AMPD2Q01433 879 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 SDHAF4Q5VUM1 108 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 C12orf56Q8IXR9 622 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 ZNF655Q8N720 491 aaPredicted RBP18.04■□□□□ 0.48
COL5A3-201ENST00000264828 CDCA5Q96FF9 252 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 EURLQ9NYK6 297 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 NPEPPSL1A6NEC2 478 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 NRP2O60462 931 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 ERAL1O75616 437 aaKnown RBP18.04■□□□□ 0.48
COL5A3-201ENST00000264828 LGALS2P05162 132 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 PAGE2Q7Z2X7 111 aa18.04■□□□□ 0.48
COL5A3-201ENST00000264828 RBMX2Q9Y388 322 aaKnown RBP18.04■□□□□ 0.48
COL5A3-201ENST00000264828 CCDC189A1A4V9 331 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.03■□□□□ 0.48
COL5A3-201ENST00000264828 C9P02748 559 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 DSELQ8IZU8 1212 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 FAM98AQ8NCA5 519 aaKnown RBP18.03■□□□□ 0.48
COL5A3-201ENST00000264828 SPATA5L1Q9BVQ7 753 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 ZYG11BQ9C0D3 744 aa18.03■□□□□ 0.48
COL5A3-201ENST00000264828 TNKS2Q9H2K2 1166 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms