RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 NTRK1P04629 796 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 PAX7P23759 505 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 GRIA3P42263 894 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 DSC2Q02487 901 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 PRKG2Q13237 762 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 CLEC4CQ8WTT0 213 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 RCN3Q96D15 328 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 QRFPRQ96P65 431 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 LPIN3Q9BQK8 851 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 SNX10Q9Y5X0 201 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 KCNU1A8MYU2 1149 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 FOXO6A8MYZ6 492 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 RGS5O15539 181 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 CYP7B1O75881 506 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 TNFAIP8O95379 198 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 BLVRAP53004 296 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 CPSF6Q16630 551 aaKnown RBP eCLIP14.04□□□□□ -0.16
CDH3-201ENST00000264012 CYP1B1Q16678 543 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 PLPP4Q5VZY2 271 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 NPAS4Q8IUM7 802 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 REM2Q8IYK8 340 aaPredicted RBP14.04□□□□□ -0.16
CDH3-201ENST00000264012 FBXO30Q8TB52 745 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 OXCT2Q9BYC2 517 aaPredicted RBP14.04□□□□□ -0.16
CDH3-201ENST00000264012 RERGLQ9H628 205 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 ZNHIT2Q9UHR6 403 aa14.04□□□□□ -0.16
CDH3-201ENST00000264012 NEDD8-MDP1E9PL57 170 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 TRAFD1O14545 582 aaPredicted RBP14.03□□□□□ -0.16
CDH3-201ENST00000264012 PRMT5O14744 637 aaPredicted RBP14.03□□□□□ -0.16
CDH3-201ENST00000264012 ACSL4O60488 711 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 GDF10P55107 478 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 CA9Q16790 459 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 GPR158Q5T848 1215 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 HECTD2Q5U5R9 776 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 SLC39A4Q6P5W5 647 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 SLC25A51Q9H1U9 297 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 LRMDAQ9H2I8 198 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 TMEM245Q9H330 911 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.03□□□□□ -0.16
CDH3-201ENST00000264012 COPG2Q9UBF2 871 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 FBXW11Q9UKB1 542 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 FZD10Q9ULW2 581 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 MATN3O15232 486 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 SHOX2O60902 331 aaPredicted RBP14.03□□□□□ -0.16
CDH3-201ENST00000264012 RECQL5O94762 991 aaPredicted RBP14.03□□□□□ -0.16
CDH3-201ENST00000264012 EOMESO95936 686 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 GSSP48637 474 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 PSMD7P51665 324 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 ABRQ12979 859 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 TIGD5Q53EQ6 642 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 DBF4BQ8NFT6 615 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 EPS8L2Q9H6S3 715 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 ZFYVE1Q9HBF4 777 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 MSRAQ9UJ68 235 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 TRAF6Q9Y4K3 522 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 RAI2Q9Y5P3 530 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 BMP10O95393 424 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 ANXA6P08133 673 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 LINC00032P0C843 101 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 COL6A2P12110 1019 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 KRT20P35900 424 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 RBM23Q86U06 439 aaKnown RBP14.03□□□□□ -0.16
CDH3-201ENST00000264012 CUZD1Q86UP6 607 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 NAT16Q8N8M0 369 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 NIPA2Q8N8Q9 360 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 C1orf50Q9BV19 199 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 FAM192AQ9GZU8 254 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 C12orf65Q9H3J6 166 aaKnown RBP14.03□□□□□ -0.16
CDH3-201ENST00000264012 DTLQ9NZJ0 730 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 TMEM216Q9P0N5 145 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 ZNF180Q9UJW8 692 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 PRR5-ARHGAP8B1AHC4 643 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 KRT36O76013 467 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 ARHGAP8P85298 464 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 GNA12Q03113 381 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 MPPE1Q53F39 396 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 PPM1JQ5JR12 505 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 ZNF276Q8N554 614 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 EFCAB3Q8N7B9 438 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 RAD21L1Q9H4I0 556 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 ATAD3AQ9NVI7 634 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 LGALS13Q9UHV8 139 aa14.03□□□□□ -0.16
CDH3-201ENST00000264012 SGTAO43765 313 aa14.02□□□□□ -0.16
CDH3-201ENST00000264012 PEX1O43933 1283 aa14.02□□□□□ -0.16
CDH3-201ENST00000264012 SLC25A14O95258 325 aaPredicted RBP14.02□□□□□ -0.16
CDH3-201ENST00000264012 GSNP06396 782 aa14.02□□□□□ -0.16
CDH3-201ENST00000264012 HSMCR30P0CW71 290 aa14.02□□□□□ -0.16
CDH3-201ENST00000264012 PKMP14618 531 aaKnown RBP14.02□□□□□ -0.16
CDH3-201ENST00000264012 TNNI3P19429 210 aa14.02□□□□□ -0.16
CDH3-201ENST00000264012 FGFR3P22607 806 aa14.02□□□□□ -0.16
CDH3-201ENST00000264012 MRPS15P82914 257 aaKnown RBP14.02□□□□□ -0.16
CDH3-201ENST00000264012 SULT2A1Q06520 285 aa14.02□□□□□ -0.16
CDH3-201ENST00000264012 CRHR2Q13324 411 aa14.02□□□□□ -0.16
CDH3-201ENST00000264012 CCDC142Q17RM4 750 aa14.02□□□□□ -0.16
CDH3-201ENST00000264012 FGD3Q5JSP0 725 aa14.02□□□□□ -0.16
CDH3-201ENST00000264012 ZCCHC8Q6NZY4 707 aaKnown RBP14.02□□□□□ -0.16
CDH3-201ENST00000264012 RTL3Q8N8U3 475 aaKnown RBP14.02□□□□□ -0.16
CDH3-201ENST00000264012 DUSP12Q9UNI6 340 aa14.02□□□□□ -0.16
CDH3-201ENST00000264012 MYRFQ9Y2G1 1151 aa14.02□□□□□ -0.16
CDH3-201ENST00000264012 AGPSO00116 658 aa14.02□□□□□ -0.16
CDH3-201ENST00000264012 TRIM38O00635 465 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms