RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 SMPD4Q9NXE4 827 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 ZNF780BQ9Y6R6 833 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 KBTBD2Q8IY47 623 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 PNMA5Q96PV4 448 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 RNF157Q96PX1 679 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 SLC4A5Q9BY07 1137 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 MGAT4AQ9UM21 535 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 SLC25A3Q00325 362 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 ANXA8L1Q5VT79 327 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 OR52E6Q96RD3 313 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 PLOD3O60568 738 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 HGFP14210 728 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 MBTD1Q05BQ5 628 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 RBM44Q6ZP01 1051 aaKnown RBP17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 DGCR14Q96DF8 476 aaKnown RBP17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 HOPXQ9BPY8 73 aaPredicted RBP17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 ARFGEF2Q9Y6D5 1785 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 CTSEP14091 401 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 TGFB2P61812 414 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 KCNJ2P63252 427 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 C15orf59Q2T9L4 293 aaPredicted RBP17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 XKR6Q5GH73 641 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 APTXQ7Z2E3 356 aaKnown RBP17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 DEFB128Q7Z7B8 93 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 TTLL2Q9BWV7 592 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 GBA2Q9HCG7 927 aaPredicted RBP17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 TNS2Q63HR2 1409 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 CCNYL3P0C7X3 344 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 IL12AP29459 219 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 DET1Q7L5Y6 550 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 PANX1Q96RD7 426 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 EBNA1BP2Q99848 306 aaKnown RBP17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 ZNF879B4DU55 563 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 CBX5P45973 191 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 ATP6V0D1P61421 351 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 TRMOQ9BU70 441 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 PCDH12Q9NPG4 1184 aa17.53■□□□□ 0.4
NOTCH3-201ENST00000263388 ROBO3Q96MS0 1386 aa17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 RFXANKO14593 260 aa17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 SH3BGRLO75368 114 aa17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 AKR1D1P51857 326 aa17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 RGS1Q08116 209 aa17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 DOK6Q6PKX4 331 aa17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 ZNF248Q8NDW4 579 aa17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 ACSS3Q9H6R3 686 aa17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 PTGFRNQ9P2B2 879 aa17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 SLC12A4Q9UP95 1085 aa17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 PQBP1O60828 265 aaKnown RBP17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 AKR1A1P14550 325 aa17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 VBP1P61758 197 aa17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 IQSEC1Q6DN90 963 aa17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 SLC9A9Q8IVB4 645 aa17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 TNS4Q8IZW8 715 aa17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 SCAIQ8N9R8 606 aa17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 CHCHD6Q9BRQ6 235 aa17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 SAMD4AQ9UPU9 718 aaKnown RBP17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 AAGABQ6PD74 315 aa17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 OGDHLQ9ULD0 1010 aa17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 RALGDSQ12967 914 aa17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 PPP1R15BQ5SWA1 713 aa17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 PTGR2Q8N8N7 351 aaPredicted RBP17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 SUSD6Q92537 303 aa17.52■□□□□ 0.4
NOTCH3-201ENST00000263388 CYP3A7-CYP3A51PA0A087WV96 503 aa17.52■□□□□ 0.39
NOTCH3-201ENST00000263388 DDTLA6NHG4 134 aaPredicted RBP17.52■□□□□ 0.39
NOTCH3-201ENST00000263388 PGRMC2O15173 223 aa17.52■□□□□ 0.39
NOTCH3-201ENST00000263388 ZSCAN5DPP0CG00 497 aa17.52■□□□□ 0.39
NOTCH3-201ENST00000263388 CYP3A7P24462 503 aa17.52■□□□□ 0.39
NOTCH3-201ENST00000263388 RPL9P32969 192 aaKnown RBP17.52■□□□□ 0.39
NOTCH3-201ENST00000263388 PSEN2P49810 448 aa17.52■□□□□ 0.39
NOTCH3-201ENST00000263388 AIF1P55008 147 aa17.52■□□□□ 0.39
NOTCH3-201ENST00000263388 PEX6Q13608 980 aa17.52■□□□□ 0.39
NOTCH3-201ENST00000263388 ATG14Q6ZNE5 492 aa17.52■□□□□ 0.39
NOTCH3-201ENST00000263388 TCF12Q99081 682 aa17.52■□□□□ 0.39
NOTCH3-201ENST00000263388 PDGFDQ9GZP0 370 aaPredicted RBP17.52■□□□□ 0.39
NOTCH3-201ENST00000263388 RMI1Q9H9A7 625 aa17.52■□□□□ 0.39
NOTCH3-201ENST00000263388 SUV39H1O43463 412 aa17.52■□□□□ 0.39
NOTCH3-201ENST00000263388 SLC22A3O75751 556 aa17.52■□□□□ 0.39
NOTCH3-201ENST00000263388 LPOP22079 712 aaPredicted RBP17.52■□□□□ 0.39
NOTCH3-201ENST00000263388 FAM92BQ6ZTR7 304 aa17.52■□□□□ 0.39
NOTCH3-201ENST00000263388 CLIC5Q9NZA1 410 aa17.52■□□□□ 0.39
NOTCH3-201ENST00000263388 HBS1LQ9Y450 684 aaKnown RBP17.52■□□□□ 0.39
NOTCH3-201ENST00000263388 MEGF6O75095 1541 aa17.52■□□□□ 0.39
NOTCH3-201ENST00000263388 MTTPP55157 894 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 FKBP1AP62942 108 aaKnown RBP17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 ILDR1Q86SU0 546 aaPredicted RBP17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 FNDC11Q9BVV2 318 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 FBXO6Q9NRD1 293 aaPredicted RBP17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 R3HDM2Q9Y2K5 976 aaKnown RBP17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 A0A087X0B3 334 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 BTG3Q14201 252 aaPredicted RBP17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 FKBP1CQ5VVH2 108 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 PHF13Q86YI8 300 aaPredicted RBP17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 PPIEQ9UNP9 301 aaKnown RBP17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 LOC110117498-PIK3R3F6TDL0 507 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 PRKAG1P54619 331 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 SPESP1Q6UW49 350 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 RBFAQ8N0V3 343 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 CKLFQ9UBR5 152 aa17.51■□□□□ 0.39
NOTCH3-201ENST00000263388 RP1P56715 2156 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms