RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 SRP72O76094 671 aaKnown RBP13.05□□□□□ -0.32
SNX1-201ENST00000261889 CPB1P15086 417 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 IL7RP16871 459 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 ZNF23P17027 643 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 XIAPP98170 497 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 ITGADQ13349 1161 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 DPYSQ14117 519 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 LAPTM4AQ15012 233 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 CLEC20AQ6ZU45 233 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 PAQR9Q6ZVX9 377 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 FUNDC1Q8IVP5 155 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 CMTR2Q8IYT2 770 aaKnown RBP13.05□□□□□ -0.32
SNX1-201ENST00000261889 CENPIQ92674 756 aaPredicted RBP13.05□□□□□ -0.32
SNX1-201ENST00000261889 PABPC5Q96DU9 382 aaKnown RBP13.05□□□□□ -0.32
SNX1-201ENST00000261889 GPR78Q96P69 363 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 SEMA4BQ9NPR2 832 aaPredicted RBP13.05□□□□□ -0.32
SNX1-201ENST00000261889 INIPQ9NRY2 104 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 ST14Q9Y5Y6 855 aa13.05□□□□□ -0.32
SNX1-201ENST00000261889 SMIM28A0A1B0GU29 152 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 CASTOR2A6NHX0 329 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 MPOP05164 745 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 MLNP12872 115 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 CAPN3P20807 821 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 RHDQ02161 417 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 MAPK11Q15759 364 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 PFKFB4Q16877 469 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 SLC44A4Q53GD3 710 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 CYHR1Q6ZMK1 362 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 PATL1Q86TB9 770 aaKnown RBP13.04□□□□□ -0.32
SNX1-201ENST00000261889 CARM1Q86X55 608 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 PDZD8Q8NEN9 1154 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 CHST13Q8NET6 341 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 FNDC8Q8TC99 324 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 GPR152Q8TDT2 470 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 TRPC4APQ8TEL6 797 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 DNAJB3Q8WWF6 145 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 WNT8BQ93098 351 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 ACOX2Q99424 681 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 GPR22Q99680 433 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 RHOJQ9H4E5 214 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 POLE4Q9NR33 117 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 SACM1LQ9NTJ5 587 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.04□□□□□ -0.32
SNX1-201ENST00000261889 MARCH4Q9P2E8 410 aaPredicted RBP13.04□□□□□ -0.32
SNX1-201ENST00000261889 CROTQ9UKG9 612 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 FAM155AB1AL88 458 aaPredicted RBP13.04□□□□□ -0.32
SNX1-201ENST00000261889 TMEM114B3SHH9 223 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 CABYRO75952 493 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 FAM163BP0C2L3 166 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 PRDX3P30048 256 aaKnown RBP13.04□□□□□ -0.32
SNX1-201ENST00000261889 ARSDP51689 593 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 MLLT10P55197 1068 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 BFSP2Q13515 415 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 LRP8Q14114 963 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 CYP2A13Q16696 494 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 ABI1Q8IZP0 508 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 TUBGCP3Q96CW5 907 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 ADI1Q9BV57 179 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 WDCPQ9H6R7 721 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 CASS4Q9NQ75 786 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 SLC45A1Q9Y2W3 748 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 A0A0J9YYE9 177 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 DLGAP1O14490 977 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 CLOCKO15516 846 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 AP1G1O43747 822 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 RAB39AQ14964 217 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 ZFP1Q6P2D0 407 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 TMEM207Q6UWW9 146 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 ARMCX2Q7L311 632 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 ZNF554Q86TJ5 538 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 CIR1Q86X95 450 aaPredicted RBP13.04□□□□□ -0.32
SNX1-201ENST00000261889 CDK15Q96Q40 435 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 MRPL46Q9H2W6 279 aaKnown RBP13.04□□□□□ -0.32
SNX1-201ENST00000261889 ZNF408Q9H9D4 720 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 CLK4Q9HAZ1 481 aaKnown RBP13.04□□□□□ -0.32
SNX1-201ENST00000261889 FBXO5Q9UKT4 447 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 SLC27A5Q9Y2P5 690 aa13.04□□□□□ -0.32
SNX1-201ENST00000261889 ZFC3H1O60293 1989 aaKnown RBP13.04□□□□□ -0.32
SNX1-201ENST00000261889 UBXN8O00124 270 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 SCAMP3O14828 347 aaKnown RBP13.03□□□□□ -0.32
SNX1-201ENST00000261889 SNRPB2P08579 225 aaKnown RBP13.03□□□□□ -0.32
SNX1-201ENST00000261889 GLUD2P49448 558 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 OAZ1P54368 228 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 CDKN2DP55273 166 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 IL1RL1Q01638 556 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 NRG1Q02297 640 aaPredicted RBP13.03□□□□□ -0.32
SNX1-201ENST00000261889 TNFAIP2Q03169 654 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 RPS6KA2Q15349 733 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 KCTD8Q6ZWB6 473 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 ZNF385DQ9H6B1 395 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 AKTIPQ9H8T0 292 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 MID1IP1Q9NPA3 183 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 WARS2Q9UGM6 360 aaKnown RBP13.03□□□□□ -0.32
SNX1-201ENST00000261889 UTS2RQ9UKP6 389 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 FAM50BQ9Y247 325 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 H3BMQ9 156 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 ENPP3O14638 875 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 GPR39O43194 453 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 FUCA1P04066 466 aa13.03□□□□□ -0.32
SNX1-201ENST00000261889 NOS2P35228 1153 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms