RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 PRORSD1PA6NEY8 169 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 FZD9O00144 591 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 ARHGEF15O94989 841 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 GPIP06744 558 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 HDCP19113 662 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 FMO1Q01740 532 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 ITGA7Q13683 1181 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 PPP4R4Q6NUP7 873 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 PRR23CQ6ZRP0 262 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 FAM220AQ7Z4H9 259 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 ZC3H3Q8IXZ2 948 aaKnown RBP4.33□□□□□ -1.72
VPS13C-202ENST00000261517 AMER2Q8N7J2 671 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 ZNF184Q99676 751 aaPredicted RBP4.33□□□□□ -1.72
VPS13C-202ENST00000261517 NR2E1Q9Y466 385 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 EML1O00423 815 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 KCNMA1Q12791 1236 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 PDCD4Q53EL6 469 aaKnown RBP4.33□□□□□ -1.72
VPS13C-202ENST00000261517 HDDC2Q7Z4H3 204 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 OR4L1Q8NH43 312 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 OMDQ99983 421 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 ILVBLA1L0T0 632 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 SLC35G4P0C7Q5 338 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 PECAM1P16284 738 aaPredicted RBP4.33□□□□□ -1.72
VPS13C-202ENST00000261517 GSTM2P28161 218 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 ADRA1BP35368 520 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 UGT1A5P35504 534 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 RPIAP49247 311 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 LRRC32Q14392 662 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 TAF1AQ15573 450 aaPredicted RBP4.33□□□□□ -1.72
VPS13C-202ENST00000261517 AGKQ53H12 422 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 PRAMEF18Q5VWM3 479 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 SULT1C3Q6IMI6 304 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 FAM183BPQ6ZVS7 135 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 PEG10Q86TG7 708 aaKnown RBP4.33□□□□□ -1.72
VPS13C-202ENST00000261517 MICU2Q8IYU8 434 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 MYLPFQ96A32 169 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 FEM1CQ96JP0 617 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 ATXN10Q9UBB4 475 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 GULP1Q9UBP9 304 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 STXBP1P61764 594 aaKnown RBP4.33□□□□□ -1.72
VPS13C-202ENST00000261517 DPYSL2Q16555 572 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 WSCD1Q658N2 575 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 IRF2BP2Q7Z5L9 587 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 OTULINQ96BN8 352 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 SLC29A3Q9BZD2 475 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 RNF208Q9H0X6 261 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 CLN6Q9NWW5 311 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 HSFX1Q9UBD0 423 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 CASTOR2A6NHX0 329 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 MATN3O15232 486 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 UBXN7O94888 489 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 MFN2O95140 757 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 RPL21P46778 160 aaKnown RBP4.33□□□□□ -1.72
VPS13C-202ENST00000261517 SRSF11Q05519 484 aaKnown RBP4.33□□□□□ -1.72
VPS13C-202ENST00000261517 USP4Q13107 963 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 GOLM1Q8NBJ4 401 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 SLC44A1Q8WWI5 657 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 FBXL18Q96ME1 805 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 ULBP1Q9BZM6 244 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 CDHR5Q9HBB8 845 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 CAB39Q9Y376 341 aaPredicted RBP4.33□□□□□ -1.72
VPS13C-202ENST00000261517 ZNF711Q9Y462 761 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 PCDH8O95206 1070 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 HGFP14210 728 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 TRAP1Q12931 704 aaKnown RBP4.33□□□□□ -1.72
VPS13C-202ENST00000261517 KIAA0930Q6ICG6 404 aaPredicted RBP4.33□□□□□ -1.72
VPS13C-202ENST00000261517 ADAMTS18Q8TE60 1221 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 RFKQ969G6 155 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 GAD1Q99259 594 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 ZNF229Q9UJW7 825 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 AP2A2O94973 939 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 UPP2O95045 317 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 CTSEP14091 401 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 ZNF23P17027 643 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 CAPZA1P52907 286 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 GAD2Q05329 585 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 CSHL1Q14406 222 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 ZBTB41Q5SVQ8 909 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 SYTL1Q8IYJ3 562 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 SUSD3Q96L08 255 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 C8orf48Q96LL4 319 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 ZNF347Q96SE7 839 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 CD320Q9NPF0 282 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 ABI3Q9P2A4 366 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.33□□□□□ -1.729e-15■■□□□ 12.4
VPS13C-202ENST00000261517 ZNF831Q5JPB2 1677 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 H3BUI4 141 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 TRIM38O00635 465 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 SOCS5O75159 536 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 ATP5A1P25705 553 aaKnown RBP4.32□□□□□ -1.72
VPS13C-202ENST00000261517 GSCP56915 257 aaPredicted RBP4.32□□□□□ -1.72
VPS13C-202ENST00000261517 MFSD4BQ5TF39 518 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 LRRC34Q8IZ02 419 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 PLD6Q8N2A8 252 aaKnown RBP4.32□□□□□ -1.72
VPS13C-202ENST00000261517 DHRSXQ8N5I4 330 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 PACRGLQ8N7B6 248 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 LPCAT1Q8NF37 534 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 ITFG1Q8TB96 612 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 RORBQ92753 470 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 CDCA3Q99618 268 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms