RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 BCCIPQ9P287 314 aaKnown RBP eCLIP15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 EBF1Q9UH73 591 aa15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 SCML1Q9UN30 329 aa15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 SPO11Q9Y5K1 396 aa15.88■□□□□ 0.13
CCDC90B-201ENST00000260054 CAPN8A6NHC0 703 aa15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 NPIPB15A6NHN6 443 aaPredicted RBP15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 K7ESF4 209 aa15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 TNFRSF10AO00220 468 aa15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 BANF1O75531 89 aa15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 RNASEH2AO75792 299 aaKnown RBP15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 MYBL2P10244 700 aa15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 ACADMP11310 421 aa15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 XPAP23025 273 aaPredicted RBP15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 HNF1BP35680 557 aa15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 CCR3P51677 355 aa15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 HIF1AQ16665 826 aa15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 TTC31Q49AM3 519 aaPredicted RBP15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 DENND2CQ68D51 928 aa15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 BMP8AQ7Z5Y6 402 aa15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 GSPT2Q8IYD1 628 aaKnown RBP15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 PGBD3Q8N328 593 aa15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 GPR161Q8N6U8 529 aaKnown RBP15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 FAM131CQ96AQ9 280 aa15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 COL25A1Q9BXS0 654 aaPredicted RBP15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 FRMD8Q9BZ67 464 aaPredicted RBP15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 FAM129AQ9BZQ8 928 aa15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 SPATA6Q9NWH7 488 aaPredicted RBP15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 B4GALT6Q9UBX8 382 aa15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 GGT7Q9UJ14 662 aa15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 ITM2BQ9Y287 266 aa15.87■□□□□ 0.13
CCDC90B-201ENST00000260054 A8MX80 341 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 AREL1O15033 823 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 ALDH1A2O94788 518 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 APBB3O95704 486 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 MGAT1P26572 445 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 TNFRSF8P28908 595 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 PXNP49023 591 aaPredicted RBP15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 TPMTP51580 245 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 ARL4CP56559 192 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 FAM193AP78312 1265 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 CRADDP78560 199 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 POU6F1Q14863 301 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 WDR93Q6P2C0 686 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 USP45Q70EL2 814 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 PDIK1LQ8N165 341 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 MPP5Q8N3R9 675 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 MYRIPQ8NFW9 859 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 BLOC1S5Q8TDH9 187 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 GANCQ8TET4 914 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 LYSMD1Q96S90 227 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 OMDQ99983 421 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 PARD6BQ9BYG5 372 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 USP36Q9P275 1121 aaKnown RBP15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 AP3B1O00203 1094 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 AURKAO14965 403 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 CTIFO43310 598 aaKnown RBP15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 PPFIA2O75334 1257 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 PAPSS2O95340 614 aaPredicted RBP15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 LHCGRP22888 699 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 TAS2R38P59533 333 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 DHX9Q08211 1270 aaKnown RBP15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 CDKN3Q16667 212 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 BBS9Q3SYG4 887 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 TMEM31Q5JXX7 168 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 USP30Q70CQ3 517 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 TSPAN33Q86UF1 283 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 NDUFAF2Q8N183 169 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 FBXL6Q8N531 539 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 CAMKK1Q8N5S9 505 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 SIGLEC10Q96LC7 697 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 FMO2Q99518 471 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 WDR83Q9BRX9 315 aaKnown RBP15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 TPSD1Q9BZJ3 242 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 MAGEE1Q9HCI5 957 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 ITM2CQ9NQX7 267 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 SYBUQ9NX95 663 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 BFARQ9NZS9 450 aa15.86■□□□□ 0.13
CCDC90B-201ENST00000260054 E7ESA3 106 aa15.85■□□□□ 0.13
CCDC90B-201ENST00000260054 MMP12P39900 470 aa15.85■□□□□ 0.13
CCDC90B-201ENST00000260054 NPY2RP49146 381 aa15.85■□□□□ 0.13
CCDC90B-201ENST00000260054 SUOXP51687 545 aa15.85■□□□□ 0.13
CCDC90B-201ENST00000260054 RALGDSQ12967 914 aa15.85■□□□□ 0.13
CCDC90B-201ENST00000260054 CCDC38Q502W7 563 aa15.85■□□□□ 0.13
CCDC90B-201ENST00000260054 ERAP2Q6P179 960 aa15.85■□□□□ 0.13
CCDC90B-201ENST00000260054 CRTC1Q6UUV9 634 aa15.85■□□□□ 0.13
CCDC90B-201ENST00000260054 CCNI2Q6ZMN8 369 aaPredicted RBP15.85■□□□□ 0.13
CCDC90B-201ENST00000260054 DPPA4Q7L190 304 aa15.85■□□□□ 0.13
CCDC90B-201ENST00000260054 KBTBD6Q86V97 674 aa15.85■□□□□ 0.13
CCDC90B-201ENST00000260054 EIF1ADQ8N9N8 165 aaKnown RBP15.85■□□□□ 0.13
CCDC90B-201ENST00000260054 RAB7BQ96AH8 199 aa15.85■□□□□ 0.13
CCDC90B-201ENST00000260054 EID2BQ96D98 161 aa15.85■□□□□ 0.13
CCDC90B-201ENST00000260054 IL22Q9GZX6 179 aa15.85■□□□□ 0.13
CCDC90B-201ENST00000260054 MTRF1LQ9UGC7 380 aaKnown RBP15.85■□□□□ 0.13
CCDC90B-201ENST00000260054 FZD4Q9ULV1 537 aa15.85■□□□□ 0.13
CCDC90B-201ENST00000260054 ZNF711Q9Y462 761 aa15.85■□□□□ 0.13
CCDC90B-201ENST00000260054 FADS3Q9Y5Q0 445 aa15.85■□□□□ 0.13
CCDC90B-201ENST00000260054 CACNA1IQ9P0X4 2223 aa15.85■□□□□ 0.13
CCDC90B-201ENST00000260054 MYLKQ15746 1914 aa15.85■□□□□ 0.13
CCDC90B-201ENST00000260054 SDR42E2A6NKP2 422 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms